Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01146 ATGAGTGCCGTAAAGTTTATTGGCAAATTACGCCTACTTTTTAGTAATGCCAAACCTTACCTCTTAATGATTGGCTTGCAATTTGGCATGGCCGGCAATTACATCTTCGGCAAGGACGTTCTCAACCATGGCATGAGTCGTTTTGTGTTCATTGTCTACCGAAATTCTATGGCCACAATTGCCCTTGCCCCTTTCGCATTCTTTCTCGAAAGGAAAAGTAGGCCTAAGATGACACTTCCAGTCTTTCTACAGATACTATTCCTGGGATTCCTCGAGCCAGTTTTTAATCAAAGCTTCACTTACTTGGGGATGAAGTATACTTCGGCTTCATTCACATCTACTATTGTGAATGCCGTGCCCTCTATCACCTTTCTCATTGCAGTCATCGTCCGGTTGGAGCGTCTAAAATTAAGGGAGATTCGGAGTCAGGCGAAAGTGATTGGAACATTAGTAACCTTTGGAGGTGCTTTGTTAATGGCAATTTACAAAGGCCCTGCTTTCAACCTTTTTCATTCTGGAAGCACAACCCCACATGAAAATGGAAGCCCCTCCTCTCACAGCCACCAAACCGCTGGGGCTATTTATATACTAATGGGGTGTGTGGCTTTGTCCTCTTTCTACATTTTGCAGTCAATAACGGTAAAAGGATACCCAGCGGAACTATCATTGGCGACGTTGATATGCTTGGCGGGAGCAGCGGAATCAACTGCAGTGGCACTTGTGGCTGAGCGTCACTCCCGTGCTTGGGCCGTTGGTTGGGATTATAGGCTCTATGCTCCTTTTTACACGGGAGTAGTTAGTTCAGGACTTGCGTACTATGTTCAAGGGCTAGTGATGAAAATAAGAGGGCCCGTATTTGCAACAGCCTTTAATCCTCTCTGCATGATCGTTGTTGCTGCTTTGGGCTCCTTTGTATTAGGAGAACAACTCCATCTTGGAAGTATCATTGGAGGCGTTGTCATCGCATTGGGTCTTTACTCGGTTGTGTGGGGCAAAGCCAAGGACTATTCCGACACCAAATTATCATCAATAGATGCAGGAGACACAAAATCACTGCCAATTACTGCAACTGATGATTCCAAAATTGATATTATTTCTGAGAATTCGGAAAAACATAAATTAGAGGGGGGAAGAAACAGAGTTGCATTTGTGAAGGTTTAA 1161 0.4436 MSAVKFIGKLRLLFSNAKPYLLMIGLQFGMAGNYIFGKDVLNHGMSRFVFIVYRNSMATIALAPFAFFLERKSRPKMTLPVFLQILFLGFLEPVFNQSFTYLGMKYTSASFTSTIVNAVPSITFLIAVIVRLERLKLREIRSQAKVIGTLVTFGGALLMAIYKGPAFNLFHSGSTTPHENGSPSSHSHQTAGAIYILMGCVALSSFYILQSITVKGYPAELSLATLICLAGAAESTAVALVAERHSRAWAVGWDYRLYAPFYTGVVSSGLAYYVQGLVMKIRGPVFATAFNPLCMIVVAALGSFVLGEQLHLGSIIGGVVIALGLYSVVWGKAKDYSDTKLSSIDAGDTKSLPITATDDSKIDIISENSEKHKLEGGRNRVAFVKV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01146 386 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Cca03g01146 386 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Cca03g01146 386 PANTHER WAT1-RELATED PROTEIN 12 362 - -
Cca03g01146 386 PANTHER WAT1-RELATED PROTEIN 12 362 IPR030184 GO:0016021|GO:0022857
Cca03g01146 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Cca03g01146 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01146 Cca-Chr3 27683658 27686554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01146 9 373 Nodulin-like Gene Family AT2G37460 47.978 5.79e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01146 - - gmx:100786326 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01146 03 27683658 27686554 Cca03g01146 03 27683658 27686554 ECH