Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01145 ATGGGAGAAATATGTTATAGTTGTTTTGGGAAGAACTTCACTAACGCAAAGCCTTACTTGTTAACGGTGGGACTACAGTTTGGATTTGCCGGAGCATACATCTTCTCCGTCGCAAGTCTCAACCATGGAATGAACCGTTATGTGTTCGTTGTCTATCGCAATGCCATCGCTGCATTGGCCCTCGCTCCTTTTGCTTTGATTTTTGAGAGGAAAATTAGGCCAAAGATTACACTCCCTGTCTTCTTACAGATAACGGCACTCGGATTTGTGGAGCCAGTGATCGACCAAGGGTTCACTTTCTTGGGGATGCAATATACATCGGCTTCATTTGCATCTGCCATAATGAATGCCGTGCCCTCCGTCACTTTTGTGCTAGCCGTAATTTTAAGGTTAGAGCGTGTAAATGTTAAGGAGGTAAGAAGCCTAGCGAAGGTGATTGGAACATTGGTAACCTTTTCAGGCGCTTTATTAATGACACTTTACAAAGGCCCTCTAATTAAACTCTTTTATACTCCAAACGCAACCCACCACCAAGATGGAAGTCACTCGCCTGAGGTTGTCAAACATTGGGTCTCAGGGACTCTCTTTCTTCTCTTGGGTTGCGTCGCATGGTCATCTTTCTTCATTTTACAGTCCATAACATTGAAAAGGTATCCGGCAGAATTCTCACTCTCTTCTTTGGTATGCTTATCGGGTGCTTTGCAAGCTAGTGTGGTGGCACTGGTCGCTACTCGTCACTCTGGCCTTGGGGCATGGGCCTTAGGCTGGAACTTCAGGCTCTATGGCCCTCTCTACACGGGAATAGTTACGTCTGGAATTACGTATTATGCGCAAGGGTTGGTATTGCAAACGAGAGGCCCAGTATTTTTAACAGCCTTCAATCCCCTTTGCATGATCATAACTTGTGCTTTAGGCTCCTTCCTTTTTGCAGACCAGCTTCACCTCGGCAGTATCATTGGAGCAATCATTATCGCGCTAGGTCTATACTCTGTGGTGTGGGGTAAAGGCAAAGACTATTCAGACCCCATGCCATCATCACCTACATCCATAACAAAGCAAATGGAGACACAACAGTTGCCAATTACCTCATCTCATATCTAA 1101 0.4541 MGEICYSCFGKNFTNAKPYLLTVGLQFGFAGAYIFSVASLNHGMNRYVFVVYRNAIAALALAPFALIFERKIRPKITLPVFLQITALGFVEPVIDQGFTFLGMQYTSASFASAIMNAVPSVTFVLAVILRLERVNVKEVRSLAKVIGTLVTFSGALLMTLYKGPLIKLFYTPNATHHQDGSHSPEVVKHWVSGTLFLLLGCVAWSSFFILQSITLKRYPAEFSLSSLVCLSGALQASVVALVATRHSGLGAWALGWNFRLYGPLYTGIVTSGITYYAQGLVLQTRGPVFLTAFNPLCMIITCALGSFLFADQLHLGSIIGAIIIALGLYSVVWGKGKDYSDPMPSSPTSITKQMETQQLPITSSHI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01145 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
Cca03g01145 366 Pfam EamA-like transporter family 192 332 IPR000620 GO:0016020|GO:0016021
Cca03g01145 366 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Cca03g01145 366 PANTHER WAT1-RELATED PROTEIN 12 356 - -
Cca03g01145 366 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
Cca03g01145 366 MobiDBLite consensus disorder prediction 343 366 - -
Cca03g01145 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01145 Cca-Chr3 27657613 27664412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01145 10 364 Nodulin-like Gene Family AT4G08300 47.899 1.42e-123 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01145 - - gmx:100812537 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01145 03 27657613 27664412 Cca03g01145 03 27657613 27664412 ECH