Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01144 ATGGGAGAAATATGCTATTCTAGTTTAGGAAAGAACTTGACCAAGGCAAAGCCTTATTTGTTAACGGTGGGACTTCAGTTTGGGTTTGCAGGAGCATACATCTTCACCATGGCCAGTCTCAAGATTGGAATGAGTCGTTACGTATTCGTTGTCTATCGCAATGCCTTCGCTGCATTGGCCCTCGCTCCTTTTGCATTCATCTTTGAGAGGAAAATTAGGCCAAAGATAACACTCCCTGTCTTCTTACAGATAATAGCACTCGGATTTCTGGAGCCAGTGATTGACCAGGGGTTCACTTTCTTGGGAATGCAATATACGTCGGCTTCGTTTGCCTCTGCTGTAGTGAATGCCACACCCTCTGTCACTTTTATACTAGCCGTAATTCTAAGGTTAGAACGTGTAAATTTTAAGGAGGTAAGAAGCCTAGCAAAAGTGATTGGGACGTTGGTAACCTTTGGAGGTGCTTTGTTAATGACACTTTACAAAGGCCCTCTAATTAACCTATTTTATTCTCCAAACACAACCCACCACCAAGACGTAAGTCACACCCCTCAGGATCTCAAACACTGGGTCTCAGGGACCCTCTTTCTACTCCTTGGTTGTTTCTCTTGGGCATCTTTCATCATTTTACAGTCCATAACATTGAAAAGGTATCCGGCAGAATTGTCACTCTCTTCTTTGGTATGCTTATCGGGTGCTTTACAAGCTAGTGTGGTGGCACTGGTGGCTACTCGTCACTCTGGGCTTGGGGCATGGGCCTTAGGTTGGGACTTCAAGCTCTATGGCCCTCTCTACACGGGAGTAGTTACGTCTGGAATTACGTATTATGTGCAAGGGTTGGTATTGCAAAGCAAAGGCCCTGTATTTTTCACAGCCTTTAATCCCCTTTGCATGATCATAACTTGTGTTCTAGGCTCATTCCTTTTTGCAGAACAGCTTCACCTTGGCAGCATCATTGGAGCCATCGTTATCGCAATGGGTCTGTACTCTGTGGTGTGGGGCAAAGGCAAAGACTGTTCAGACCCCACTCCACCAAAGCACACCGAGACACAACCTCTTCCAATTACCTCATCTCATATCTAA 1083 0.4534 MGEICYSSLGKNLTKAKPYLLTVGLQFGFAGAYIFTMASLKIGMSRYVFVVYRNAFAALALAPFAFIFERKIRPKITLPVFLQIIALGFLEPVIDQGFTFLGMQYTSASFASAVVNATPSVTFILAVILRLERVNFKEVRSLAKVIGTLVTFGGALLMTLYKGPLINLFYSPNTTHHQDVSHTPQDLKHWVSGTLFLLLGCFSWASFIILQSITLKRYPAELSLSSLVCLSGALQASVVALVATRHSGLGAWALGWDFKLYGPLYTGVVTSGITYYVQGLVLQSKGPVFFTAFNPLCMIITCVLGSFLFAEQLHLGSIIGAIVIAMGLYSVVWGKGKDCSDPTPPKHTETQPLPITSSHI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01144 360 Pfam EamA-like transporter family 192 332 IPR000620 GO:0016020|GO:0016021
Cca03g01144 360 Pfam EamA-like transporter family 29 159 IPR000620 GO:0016020|GO:0016021
Cca03g01144 360 PANTHER WAT1-RELATED PROTEIN 12 349 IPR030184 GO:0016021|GO:0022857
Cca03g01144 360 MobiDBLite consensus disorder prediction 338 360 - -
Cca03g01144 360 PANTHER WAT1-RELATED PROTEIN 12 349 - -
Cca03g01144 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Cca03g01144 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01144 Cca-Chr3 27633913 27642293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01144 10 357 Nodulin-like Gene Family AT1G44800 50.716 2.17e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01144 - - gmx:100775669 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01144 03 27633913 27642293 Cca03g01144 03 27633913 27642293 ECH