Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01143 ATGGGAACGTGGTTCGCAAATGCAAAGCCGTATCTGCTGTTAGTGGCGGTTCAATTCGGTTCTGCTGGAATGTTCATTTTTGCCATGGATGCTATTAAGAAGGGAATGAGCCATTTCGTCTTCATCGTCTATCGTAATGCCATCGCCTCTATAACTCTCGCTCCCTTCGCATTTTTTCTAGAAAGGAAAGTTAGGCCCAAGATGAGTTTCCGGGTATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTCGCCCTCTTGGGCATGAAATTCACGTCGGCTTCTTTCCTATCTGCTGTCATGAACTCAGCACCCTCTGTTACTTTTGTGATGGCAGTCATTCTAGGAATGGAGCGCATGAAGATTAAGGAGGTAGCATGTCAAGCGAAAGTGATTGGCACAGTAGTAACCTTTGGAGGCACTTTGCTAATGGCACTATACAAAGGCCCTGGGCTTAGTATTATGGGATCTTCAGCCAGCAATGCTAGCCAACCTCAGAATGTTAGCAACCCCACTGGCAACCACTGGGTCATTGGGACATGTTTCCTTCTCATTGGTTGTGCAGGCTTTTCTGCATTTTACATATTACAAGCCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTCGCCACTTGGGTTTGCTTTTTTGGTGCAATTCAAAGCTCTGCTGTTGCAATCGTCGCCGAACGTCATCGCCCTCATGCCTGGTCCCTTGGTTGGGATACAAGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACATCTGGAGTTCAGTATTACATACAAGGCATGATCGTAAAATCTATGGGGCCAGTTATTGTGACTGCTTTTAACCCCCTTCGTATGATCATTGTTACGGGCTTGGCCTGTGTCATCCTCTCTGAACAACTCTACCTCGGAAGTGGTTGTGGTTCTTGGGCTTTATGTAGTAGTGTGGGGAAAAGCTAA 969 0.4603 MGTWFANAKPYLLLVAVQFGSAGMFIFAMDAIKKGMSHFVFIVYRNAIASITLAPFAFFLERKVRPKMSFRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILGMERMKIKEVACQAKVIGTVVTFGGTLLMALYKGPGLSIMGSSASNASQPQNVSNPTGNHWVIGTCFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFFGAIQSSAVAIVAERHRPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMIVKSMGPVIVTAFNPLRMIIVTGLACVILSEQLYLGSGCGSWALCSSVGKS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01143 322 PANTHER WAT1-RELATED PROTEIN 7 312 - -
Cca03g01143 322 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Cca03g01143 322 Pfam EamA-like transporter family 184 312 IPR000620 GO:0016020|GO:0016021
Cca03g01143 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Cca03g01143 322 PANTHER WAT1-RELATED PROTEIN 7 312 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01143 Cca-Chr3 27589431 27593484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01143 7 317 Nodulin-like Gene Family AT2G37460 44.051 4.53e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01143 - - gmx:102665912 554.288