Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01140 ATGGAGGACCAAAATGGTAGTGGTAAGTTCAGTGAGGGGCTTCGCAAGGTGAAGCCTTATCTTGCTATATTGTCCCTTCAGTTTGGCTACTCAGGGATGTATATCATCACTATGGTTTCTTTCAAGCATGGCATGAGTCATTGGATACTCTCAGTCTACCGTCATGTAGTTGCAGCTATTATAATTGTCCCCTTTGCACTTGTCCTTGAAAGAAAAATACGACCAAAGATGACTCTTCCCATCTTCCTCAGGATAGTGGCACTTGGTTTCCTCGAGCCAGTGCTAGATCAGAACCTGTATAACATGGGGATGAAAATGACCTCAACAACGTTTGCATCGGCCACTGTTAATGTCCTCCCGGCCATAACTTTCGTAATGGCACTCATTTTCAGGCTAGAGAAGGTGAACTTGAGAAAATTCCACAGCCTAGCCAAGGTCATTGGAACAGTTATAACAGTTTCAGGAGCTATGGTTATGACCCTGTACAAAGGCCCTGCATTTCAAATCATAAAGGGTGGAGGAGCCATCAGCCAGCATAGCAACTCTACCAGTACTACCACTGAACCCTCTGACCAGCATTGGATAGTTGGCACATTAATGCTCGTATCAAGTTGTGCTAGTTGGGCTGGTTTCTTTATTCTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTCTCACTCACAGCTTGGATTTGCGTGATGGGTATCATTGAGGGTTCAATCGCATCCCTTATATTTGAAAGAGACTTCAGTGTGTGGGCCATAGGCTGGGACTCTAGGCTTCTTGCTTGTGTTTATTCTGGGGTGATATGTTCTGGAATGGCGTATTATGTGCAAGGGGTTGTAACTAGGGAACGTGGACCAGTGTTTGTGACATCTTTCAGCCCTCTATGTATGATTATCACTGCTGCATTGGGTTCCCTTGTCTTAGCCGAACAAGTTCATCTAGGAAGTATATTTGGGGCGATTCTGATTGTGTGTGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCCGAGCGTTGAGCTTTTCACCCGCAAGAGAGAGGGTGTTGGTCATTGA 1068 0.4541 MEDQNGSGKFSEGLRKVKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFVMALIFRLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAISQHSNSTSTTTEPSDQHWIVGTLMLVSSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDPSVELFTRKREGVGH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01140 355 PANTHER WAT1-RELATED PROTEIN 13 341 IPR030184 GO:0016021|GO:0022857
Cca03g01140 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Cca03g01140 355 PANTHER WAT1-RELATED PROTEIN 13 341 - -
Cca03g01140 355 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020|GO:0016021
Cca03g01140 355 Pfam EamA-like transporter family 29 152 IPR000620 GO:0016020|GO:0016021
Cca03g01140 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01140 Cca-Chr3 27520633 27524451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01140 14 344 Nodulin-like Gene Family AT4G08300 69.970 4.28e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01140 - - gmx:100783910 654.825