Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01120 ATGTTTAAAAACTCGTGTGAAGTCATACTGAAGGAATTGAAACATTGGATGGCACCAGAAAAGGTCAAAACTTCAATCAGAACTTTTCCTTCTTCAGCTGAAATAGTGCCTGAACCGTTGGGTGTTGTGTTAGTCATCTCTCCATGGAACTATCCAATTTTGTTGTCCCTCGATCCAGTTGTTGGAGCTATAGCAGCTGGTAATGCTGTGATTTTAAAACCATCAGAAATTGCTCCGGCCTCATCATCACTACTAGCAAAATTGATTGAGAAGTATATGGATAACTCATTTATAAGAGTTGTCGAGGGGGCAGTTGATGAAACAACTGCACTGTTGCAGCAAAAGTGGGATAAGATTTTCTATACAGGTAATGGAAGAGTGGGAGAAATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTGTACTGGAGCTTGGAGGAAAATCTCCTGTTGTTGTTGATTCAAATATCGATTTACAGGTAGCCACTAGACGAATAATTTCTGGCAAGTGGGGGTTGAACAATGGACAAGCTTGCATTTCTCCAGATTATGTGATAACAACAAAAGACTACGCTCCCAAATTGGTGGATGCCCTAAAGACTGAATTGGAGAATTTTTATGGAAAGAACCCGTTGGAATCAGAAGATTTGTCCCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAGCTCTTGGATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAAGAAATTAAGGATTGCTCCCACTGTTTTACTGGATGTTCCGCGAGATTCTCTGATAATGGGCGAGGAGATATTTGGTCCATTGCTTCCTATCATCACGGTCAATAAACTGGAAGAAAGTATAGATGTCATAAATTCAGGAACAAAGCCCCTTGCTGCATATATATTTACAACCGACAAGAAGTTCAAGGAACAGTTCGTAATGAATGTTTCTGCCGGGGGTTTGCTTGTCAATGACACTGCCTTACATCTTGTGGTTCATACTTTGCCATTCGGGGGAGTTGGGGAGAGTGGGATGGGAGCGTACCACGGGAAGTTCTCCTTTGATGCTTTTACACACAAAAAAGCTGTTCTTTATCGCAGTTTTGCTGGTGATGGATCAATAAGGTACCCACCGTACACGGATACAAAACTGAGATTGATGAGGGCTCTTATTGGTGGTAGTATCCTTGGCATACTTCGTGCTCTTTTCAGATGGTCCTAA 1236 0.4175 MFKNSCEVILKELKHWMAPEKVKTSIRTFPSSAEIVPEPLGVVLVISPWNYPILLSLDPVVGAIAAGNAVILKPSEIAPASSSLLAKLIEKYMDNSFIRVVEGAVDETTALLQQKWDKIFYTGNGRVGEIVMTAAAKHLTPVVLELGGKSPVVVDSNIDLQVATRRIISGKWGLNNGQACISPDYVITTKDYAPKLVDALKTELENFYGKNPLESEDLSRIVSSNHFARLSKLLDDDKVSGKIVYGGEKDEKKLRIAPTVLLDVPRDSLIMGEEIFGPLLPIITVNKLEESIDVINSGTKPLAAYIFTTDKKFKEQFVMNVSAGGLLVNDTALHLVVHTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDGSIRYPPYTDTKLRLMRALIGGSILGILRALFRWS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01120 411 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 366 IPR016162 GO:0016491
Cca03g01120 411 PANTHER ALDEHYDE DEHYDROGENASE 1 411 - -
Cca03g01120 411 Pfam Aldehyde dehydrogenase family 31 368 IPR015590 GO:0016491
Cca03g01120 411 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 148 348 IPR016163 GO:0016620
Cca03g01120 411 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 144 151 IPR029510 GO:0016491
Cca03g01120 411 PANTHER ALDEHYDE DEHYDROGENASE 1 411 IPR012394 GO:0006081
Cca03g01120 411 PIRSF ALDH 1 406 IPR012394 GO:0006081
Cca03g01120 411 SUPERFAMILY ALDH-like 5 374 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01120 Cca-Chr3 27164811 27171392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01120 1 408 Aldehyde Dehydrogenase Gene Family AT1G44170 72.059 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01120 K00128 - gmx:100803104 752.666