Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01119 ATGGCAGAGCGTGTGTTACTCACTCCTCCTTCACTGCCTTTACCATCTCAACACTCTCCAACCACGATGGCTCTTCTGGGCGGCGCCGCCTCCGCTCGCGTCATTCCCTCCGCCTCGCTCTCCGCCtcttctcgttccttcttctccttctcctcttcctcctcGCTCCAATGCTTGCGCTCCTCTCCTCGCATTTCTCACCTCTTTCTCAATCAGCGGAGGGCGGAGGTTCGCGTTTCTAGTGGAGGATACGGAACAGTGTCGGCGCCGAAGTCCTTCGCGTCGGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTCAGGTCTAAGTTCTGCCATCCTATTCTGATTCGCTTGGGGTGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAATTGAGCTGAAGCATGCAGCAAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCACAAATCCCTATGAAATATGGAAGAGTGGATGTATCTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGTCCCCCTTCACCTGCTGATCATTTACGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAAGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGATCGCAGTGGTTGGGGAAAGCCTGAGACTAAATATACGAAAGATGGGCCAGGAGCACCTGGAGGACAATCCTGGACAGCTCAATGGTTGAAATTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGAAGACCCGTCCTTCAAGGTATATGCTGAGAAATATGCCGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCAAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGGGGCAGAGAAGTTTGTAGCAGCCAAATACTCCTCTGGAAAGAGAGAGCTGTCTGAGGCTATGAAGCAGAAGATACGTGCTGAATATGAGGCAGTTGGTGGAAGCCCAGATAAGCCTCTACAGTCGAACTATTTTCTAAATATCATGATTATTGTTGCTGTTTTGGCACTTTTGACATCACTGCTTGGAAGCTAG 1290 0.4605 MAERVLLTPPSLPLPSQHSPTTMALLGGAASARVIPSASLSASSRSFFSFSSSSSLQCLRSSPRISHLFLNQRRAEVRVSSGGYGTVSAPKSFASDPDQLKSAREDIKELLRSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPQIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIGAEKFVAAKYSSGKRELSEAMKQKIRAEYEAVGGSPDKPLQSNYFLNIMIIVAVLALLTSLLGS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01119 429 Gene3D Peroxidase, domain 2 225 348 - -
Cca03g01119 429 PRINTS Haem peroxidase superfamily signature 117 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Haem peroxidase superfamily signature 179 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Haem peroxidase superfamily signature 197 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Haem peroxidase superfamily signature 287 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 ProSiteProfiles Plant heme peroxidase family profile. 179 398 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 Pfam Peroxidase 104 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 382 429 - -
Cca03g01119 429 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 22 369 - -
Cca03g01119 429 Gene3D - 103 356 - -
Cca03g01119 429 SUPERFAMILY Heme-dependent peroxidases 97 356 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Plant ascorbate peroxidase signature 96 116 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Plant ascorbate peroxidase signature 117 132 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Plant ascorbate peroxidase signature 178 196 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Plant ascorbate peroxidase signature 197 209 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PRINTS Plant ascorbate peroxidase signature 316 340 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01119 429 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 382 429 IPR044831 GO:0004601|GO:0034599
Cca03g01119 429 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 22 369 IPR044831 GO:0004601|GO:0034599
Cca03g01119 429 MobiDBLite consensus disorder prediction 254 286 - -
Cca03g01119 429 CDD ascorbate_peroxidase 88 358 - -
Cca03g01119 429 ProSitePatterns Peroxidases proximal heme-ligand signature. 247 257 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01119 Cca-Chr3 27118079 27124411 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01119 103 353 Peroxidase AT5G66390 29.010 2.13e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01119 K00434 - qsu:111986906 677.167