Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01114 ATGAAATTTGAAAACAACAATGCTGGTCCCCCTTCACCTGCTGATCATTTACGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAAGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGATCGCAGTGGTTGGGGAAAGCCTGAGACTAAATATACGGTATATTATCTTCCTTTTTGCCCAAAAGTCAGAAGAAATGATTTTGTAGAAGTCTTTGAAATCTTTTGA 243 0.3992 MKFENNNAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTVYYLPFCPKVRRNDFVEVFEIF 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01114 80 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 7 54 - -
Cca03g01114 80 ProSitePatterns Peroxidases proximal heme-ligand signature. 30 40 IPR019793 -
Cca03g01114 80 SUPERFAMILY Heme-dependent peroxidases 8 73 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca03g01114 80 Pfam Peroxidase 10 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g01114 80 Gene3D Peroxidase, domain 2 8 59 - -
Cca03g01114 80 PRINTS Plant ascorbate peroxidase signature 24 45 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01114 80 PRINTS Plant ascorbate peroxidase signature 6 23 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cca03g01114 80 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 7 54 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01114 Cca-Chr3 26997622 26998224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01114 7 44 Peroxidase AT5G06720 46.341 1.22e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01114 K00434 - gmx:100802238 111.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01114 03 26997622 26998224 Cca06g01246 06 26937426 26939866 ECH
Cca03g01114 03 26997622 26998224 Cca03g01114 03 26997622 26998224 ECH