Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01063 ATGGTTGGACACTTTAATAATCTAATACACACTTTTGAATTTGTCCTCACTTGCAACCAAACCCTTTCACCACAAACCCTTTTCCTCAAAAACTATAATTCATTGGTGCGTGTGCTAAACATCTCACTCGATGGCCAACTCGACATTTCATTGCCAATAGCCATAAATTGCAATGAAATTAGCCAGTCAGTGAATGAAAGCAATCAGCACCGGCGCTTCGAGTTTGACCTGGCGCCTTTTCACTTGTCTTCCAAGAAAAACAAGCTAACTGTGGTGGGAAGTGACGCCGCTGGGTTACTATGGCCTTCGATTGAAAACTCTTTTACTGTAGCATGCGTGTCTTTGTACGACGATGTGGTGGATGAGCCAGCATCTAATGAAAGCTCATGCTCCGGCACTTTTTGTTCAATCGGCCTTCCGACACCTGCGGTTATGCATTTCTGGTTAAGGACGGAGCCTACAGTTTCTCTAGCAAAGACCTTGTCGTCAACGCATACATTAATAAAAAACAGAGAGAATAATTTTGTTTCCACTTGTTTATGTCTAGGTGTGAGTGTGAGCATCTTAACCCTTATCGGGGGAACCTTTTATGTGTATTGGACATCAAAGAAAAGCAAGCTCATGAAACTTAAAGAACATTTTTTTCAAAAAAATGGTGGTCTGCTCTTGCAACAAGAATTAGTTAGGTATAGTGGGTCAGCTGAAATGACTAAAATCTTTACCATGGAGGAACTAAAGGAGGCCACCAACAATTTCGATGAAGGCACAGTCCTAGGCCAAGGTGGCCAAGGAACAGTTTACAAAGGAATATTACCTGACAATAGAATTGTGGCAATAAAAATGTCCAAAATTAGCAATCCAAACCAAATTGAGCAATTCATCAATGAGGTGATCTTGCTTTCTCGAATCAACCATAGGAATGTGGTGAAGATCTTGGGATGTTGTTTAGAGGCAGAAGTTCCCTTGCTCGTTTATGAATTCATCCCCAACGGTACTGTTTATGAGCATCTTCACAATCAAAGCCAATCTTTAAGACTTACATGGAAAACACGATTGCAAATAGCAACAGGAAGTGCTGGGGCCCTAGCATACTTGCATTCTGCTACCACT 1110 0.4144 MVGHFNNLIHTFEFVLTCNQTLSPQTLFLKNYNSLVRVLNISLDGQLDISLPIAINCNEISQSVNESNQHRRFEFDLAPFHLSSKKNKLTVVGSDAAGLLWPSIENSFTVACVSLYDDVVDEPASNESSCSGTFCSIGLPTPAVMHFWLRTEPTVSLAKTLSSTHTLIKNRENNFVSTCLCLGVSVSILTLIGGTFYVYWTSKKSKLMKLKEHFFQKNGGLLLQQELVRYSGSAEMTKIFTMEELKEATNNFDEGTVLGQGGQGTVYKGILPDNRIVAIKMSKISNPNQIEQFINEVILLSRINHRNVVKILGCCLEAEVPLLVYEFIPNGTVYEHLHNQSQSLRLTWKTRLQIATGSAGALAYLHSATT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01063 370 ProSiteProfiles Protein kinase domain profile. 252 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g01063 370 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 176 369 - -
Cca03g01063 370 Pfam Protein tyrosine and serine/threonine kinase 255 368 IPR001245 GO:0004672|GO:0006468
Cca03g01063 370 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 11 136 IPR045274 GO:0007166
Cca03g01063 370 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 11 136 - -
Cca03g01063 370 SMART tyrkin_6 252 370 IPR020635 GO:0004713|GO:0006468
Cca03g01063 370 SUPERFAMILY Protein kinase-like (PK-like) 238 367 IPR011009 -
Cca03g01063 370 Gene3D Transferase(Phosphotransferase) domain 1 228 370 - -
Cca03g01063 370 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 176 369 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01063 Cca-Chr3 25830853 25843354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01063 184 370 Receptor kinase-like Gene Family AT1G16130 52.660 2.10e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Cca03g01063 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01063 - - gsj:114410917 310.457