Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01032 ATGCTCTTCTTGTTCCTCGGTTTTACAGGGATAACAATGACTCAGAGCTTTTTATTCCTGGGTCTAAGTTATAGTTCACCAATACTTGTGTGTGCCATGGGCCACTTGATCGCAACCTTTAACTTTCTGCTCTCTCTCATTCTCAGGAAGACAGAGTTGAATTTGAGAAGGCCTGGTGTCCAAGTCCAAGTGATTGGTATCTTTGTATCAATAATGGGAGCAGTCGTAGCTGAATTCTTCAAAGGACCCCTTGTAAGACCATCTTCTCACCATCTTAGACACACTAAACAACTTCTTGTCTTCTCTTCAACACCAGAGTTTTGGCTTCTTGGTGGTGTTTTGCTTGTTGCAGCTTCCTTCTCAGTTTCAATTTCCAACTTAGTCCAGAAAGAAAGTTTCAAGCAATATCCAGAACCAGTGAAGGTGCTTTCTTATTCTAGCTTAGTTGGGACAATCCTCAGTGCAATAGTCTCATGCATAGTGGAGAGAGACATAAATGCTTGGAAGCTAAGGCGTAGCAAGGATCTCATTCTCATTGTTTTAACTGCAGTAGTTGGGGGTGTGATTCGTCCCAATATTCAAATATGGTTCACTCGCATGAAGGGTCCACTTTACGTCTCACTTTTCAAGCCCTTTGGTATTGCCTTTGCCACTACTTTTGCAGTTTCCTTCTTTTCTAACAGCCTTCATTATGGAAGTGTAATAGGAGCAACTGTACTTGGAGTGGGGTATTATATAATAATGCATGGAGAAATCAAAGGAAACGAAGAAAAGACAGGCTGTGACGAAAGCTCATCAGATTCTTTGGACAAGAAGATACCTCTTTTGCAAGAACATATGCAAGTGTGA 849 0.4134 MLFLFLGFTGITMTQSFLFLGLSYSSPILVCAMGHLIATFNFLLSLILRKTELNLRRPGVQVQVIGIFVSIMGAVVAEFFKGPLVRPSSHHLRHTKQLLVFSSTPEFWLLGGVLLVAASFSVSISNLVQKESFKQYPEPVKVLSYSSLVGTILSAIVSCIVERDINAWKLRRSKDLILIVLTAVVGGVIRPNIQIWFTRMKGPLYVSLFKPFGIAFATTFAVSFFSNSLHYGSVIGATVLGVGYYIIMHGEIKGNEEKTGCDESSSDSLDKKIPLLQEHMQV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01032 282 Pfam EamA-like transporter family 111 247 IPR000620 GO:0016020|GO:0016021
Cca03g01032 282 PANTHER WAT1-RELATED PROTEIN 3 279 - -
Cca03g01032 282 PANTHER WAT1-RELATED PROTEIN 3 279 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01032 Cca-Chr3 25241846 25246004 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01032 4 282 Nodulin-like Gene Family AT1G70260 46.259 5.60e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01032 - - gmx:100803495 462.225