Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01029 ATGAAGGAAGTGGGCGTGGTTGCCGTGATGTTGACGGCAGAGTTGTTGGACGTGATCGTCAACACTGTAAGCAAAGCAGCCATGAAGAAGGGCATGAATGACTTTGTGTTCGTCATGTACTCCAATGCCTTCGCTGCATGCTTCCTCTTTCTCATAACCTTAATCTTTTATAGGAAAAGAACACTTCCTCCACTCTCCTACAACATCGTTGGTCTGTTTTTTGTTGTAGGATTGATCAGTTGCAGTAATCAGATGTTCAAGTTTTTTGGCATAGGTTACAGCTCTCCTACTTTGGCCTCAGCTCTCTCTGATTTGATCCCCGCTTTTACCTTCATACTTGCCATCATCTTCAGGATGGAAAAATTTGTCTGGAAAGCTAACAGCACCGTGGCCAAGTCTATTGGCACATTTGTATCAATCTCTGGGGCCTTGATAATGTCTCTTTACAAAGGGCAGGCAGTGATAAATAGTGGTCCCTCTCTTAAATTGTTACCTAAAAAACTTGCTTCGTCTATGGAATTTGACTGGGTATTTGGGGCAGCGTTGCTTGCGGCTCATAGCTGTTTTCTTTCAATAAACTATATACTTCTGACACGGATAGTTAGAGAATACCCTGCAGAGCTGGTTGTGGTACTTACTCGCATTGCATTAGTCTCTATACTGTCTGTTCCTGCTGCGGTGATTTCAGTAAAGGATCTAAAAGATTTGAGATTGGGATTTAATATGGAGTTGATAGCTATTGGATGTTCAGTAAGAATAGAAAATGATGTTATTTCCTATGTCAAGTCAACATAA 795 0.4151 MKEVGVVAVMLTAELLDVIVNTVSKAAMKKGMNDFVFVMYSNAFAACFLFLITLIFYRKRTLPPLSYNIVGLFFVVGLISCSNQMFKFFGIGYSSPTLASALSDLIPAFTFILAIIFRMEKFVWKANSTVAKSIGTFVSISGALIMSLYKGQAVINSGPSLKLLPKKLASSMEFDWVFGAALLAAHSCFLSINYILLTRIVREYPAELVVVLTRIALVSILSVPAAVISVKDLKDLRLGFNMELIAIGCSVRIENDVISYVKST 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01029 264 PANTHER WAT1-RELATED PROTEIN 8 247 IPR030184 GO:0016021|GO:0022857
Cca03g01029 264 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Cca03g01029 264 Pfam EamA-like transporter family 10 146 IPR000620 GO:0016020|GO:0016021
Cca03g01029 264 PANTHER WAT1-RELATED PROTEIN 8 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01029 Cca-Chr3 25143755 25146166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01029 1 250 Nodulin-like Gene Family AT3G28050 40.873 5.55e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01029 - - gmx:100500595 402.134