Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01024 ATGAAGGAGTTGATTCTTGTTGCAGCTCTGTTGACAATAGAGTTGTTGGACGTGATCGTGTACACTGTAAGCAAAGCAGCAATGAGAGAGGGCATGAATGACTTCGTCTTTGTCATGTATTCCAATGCCTTTGCAGCATGCTTCCTTCTTCCCATCACCTTTTTCTTCTATAGGAAAACACCTCTTCCACCACTCACATATTGCATACTTGCCCAATTATTCATTAATTCCCTTTTAAGTTGCAGTGTTCAGATGCTCAGGTATCTTGGAATAGGTTACAGTACTCCTACTTTGGCCACAGCTATGTCTGATTTAATCCCAGCTTTTACCTTCATACTTGCCATTCTCTTCAGGATGGAAAAATTGAATTGGAAAGCTAATAGCACTCAGGCCAAGTCCATTGGCACACTCGTATCAATCACTGGAGCTTTCATAATTACTCTATACAGAGGCCAGGCCATCATAAATAATCATCCATCTTTACACTTGTCTTCTAATAAACTTGGTTCATCTGAGCAATTTCACTGGATAATAGGGGCAGTGTTGCTTGCGACTCATAGCTTTGTTCTCTCTTTATTGTTTATAGTTCAGACATGGATAATCAGAAATTACCCTGCAGAGCTTGTGATAGTACTCACTCGAGCTATAATAGTCTTTATGATATCTCTTCCGGTTTCACTGATTTCAGTAAAGGATCCAAAAGCTTTGAGACTGGGATTTAATGTGCAGTTGGTAGCTATTATATGTGCAGCAATTTTTACTGTATCACTTCGAAGTATTGTTCATATATTGGTCATGGAAAAGAAGGGCCCTCTCTATGTTGCAATGTTTAAGCCAATTGGAATAATTTTTGCGGTCATCTTGGGTATTACTTTTCTTGGAGATTCTCTCTATTTTGGAAGTGTAATTGGAGCAGCAGTAGTGGTTATTGGTTTTTATGCCGTTATTTGGGGGAAAAGCAAAGAGAAAGCAGAGGAAGAGTGTGAAATGTATACCTCGGCATCGTGCTCAACTGTGGTCCCTCTTTTGCAGAACAAGAAAATTGAGGAGTAG 1053 0.396 MKELILVAALLTIELLDVIVYTVSKAAMREGMNDFVFVMYSNAFAACFLLPITFFFYRKTPLPPLTYCILAQLFINSLLSCSVQMLRYLGIGYSTPTLATAMSDLIPAFTFILAILFRMEKLNWKANSTQAKSIGTLVSITGAFIITLYRGQAIINNHPSLHLSSNKLGSSEQFHWIIGAVLLATHSFVLSLLFIVQTWIIRNYPAELVIVLTRAIIVFMISLPVSLISVKDPKALRLGFNVQLVAIICAAIFTVSLRSIVHILVMEKKGPLYVAMFKPIGIIFAVILGITFLGDSLYFGSVIGAAVVVIGFYAVIWGKSKEKAEEECEMYTSASCSTVVPLLQNKKIEE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01024 350 Pfam EamA-like transporter family 17 147 IPR000620 GO:0016020|GO:0016021
Cca03g01024 350 PANTHER WAT1-RELATED PROTEIN 16 339 - -
Cca03g01024 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 149 - -
Cca03g01024 350 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01024 Cca-Chr3 25095478 25097978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01024 2 350 Nodulin-like Gene Family AT3G28050 42.541 8.72e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01024 - - gmx:100804032 537.339