Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01023 ATGTTTTCTGTTTTCAGTTATTTGGCGCAGGCTTTTGGCTACGCTGGGATTTACTACGGCTCTGCTACACTCAGCACATCCATGCTCAACCTCGTTCCTGGTTTTACTTTCCTACTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGAGAAAATTTAGCAGCCAAGCTAAATTGTTGGGAACAATAGTATCAATTGCTGGTGCATTTATTGTGACTTTGTACAAAGGCCCTGCACTTTTGATGGGAGTATCATCTGTAAACTCATCTCAGCTGCCACTTCTCTCAGAAGATTCTAATTGGATACTCGCAGGAGTATTGCTTGCAGCTGATTGTATAATGGCTTCAGCATATATTATTGTACAGGCTTATATTCTTAAGAAATATCCAGCAGAATTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGGCATTCAATCTGGTGTTACCTGTTTGGTTGTGGAAAGAGACATCAGTGCCTGGAGCTTGGAACCTAAGTTAAGGTTGCTTGCAGTTTTATACTCGGGAGTCTTTGGCTCTGCATTTCAAGTTGGTGTTATTACTTGGTGCTTGCACCAGACAGGACCTGTTTTTATTTCCATGTTCAAGCCCTTAGGAATTGTCATATCAGTGGTTTTAGGTTTTCTCTTCCTTGGGGATGCATTCTATCTTGGAAGTCTAATTGGTGCAATTGTGATTGTTGTTGGGTTTTATTCTGTATTATGGGGAAAAGCCAAAGATATCGAAGATGTCGGAGTGAGAAGCTTGGAATCAAAGGGAAAACAGACACCCCTTTTGGAGGAAAACAGCCATGAAGACATACAAGGGCATTAG 834 0.4029 MFSVFSYLAQAFGYAGIYYGSATLSTSMLNLVPGFTFLLAVLFRMEQLDWRKFSSQAKLLGTIVSIAGAFIVTLYKGPALLMGVSSVNSSQLPLLSEDSNWILAGVLLAADCIMASAYIIVQAYILKKYPAELIVVFFYCFFVGIQSGVTCLVVERDISAWSLEPKLRLLAVLYSGVFGSAFQVGVITWCLHQTGPVFISMFKPLGIVISVVLGFLFLGDAFYLGSLIGAIVIVVGFYSVLWGKAKDIEDVGVRSLESKGKQTPLLEENSHEDIQGH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01023 277 PANTHER WAT1-RELATED PROTEIN 3 251 IPR030184 GO:0016021|GO:0022857
Cca03g01023 277 SUPERFAMILY Multidrug resistance efflux transporter EmrE 4 76 - -
Cca03g01023 277 Pfam EamA-like transporter family 107 241 IPR000620 GO:0016020|GO:0016021
Cca03g01023 277 SUPERFAMILY Multidrug resistance efflux transporter EmrE 162 245 - -
Cca03g01023 277 PANTHER WAT1-RELATED PROTEIN 3 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01023 Cca-Chr3 25068140 25070589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01023 7 273 Nodulin-like Gene Family AT5G40240 44.161 5.65e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01023 - - gmx:100804932 489.189