LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca03g01023	ATGTTTTCTGTTTTCAGTTATTTGGCGCAGGCTTTTGGCTACGCTGGGATTTACTACGGCTCTGCTACACTCAGCACATCCATGCTCAACCTCGTTCCTGGTTTTACTTTCCTACTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGAGAAAATTTAGCAGCCAAGCTAAATTGTTGGGAACAATAGTATCAATTGCTGGTGCATTTATTGTGACTTTGTACAAAGGCCCTGCACTTTTGATGGGAGTATCATCTGTAAACTCATCTCAGCTGCCACTTCTCTCAGAAGATTCTAATTGGATACTCGCAGGAGTATTGCTTGCAGCTGATTGTATAATGGCTTCAGCATATATTATTGTACAGGCTTATATTCTTAAGAAATATCCAGCAGAATTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGGCATTCAATCTGGTGTTACCTGTTTGGTTGTGGAAAGAGACATCAGTGCCTGGAGCTTGGAACCTAAGTTAAGGTTGCTTGCAGTTTTATACTCGGGAGTCTTTGGCTCTGCATTTCAAGTTGGTGTTATTACTTGGTGCTTGCACCAGACAGGACCTGTTTTTATTTCCATGTTCAAGCCCTTAGGAATTGTCATATCAGTGGTTTTAGGTTTTCTCTTCCTTGGGGATGCATTCTATCTTGGAAGTCTAATTGGTGCAATTGTGATTGTTGTTGGGTTTTATTCTGTATTATGGGGAAAAGCCAAAGATATCGAAGATGTCGGAGTGAGAAGCTTGGAATCAAAGGGAAAACAGACACCCCTTTTGGAGGAAAACAGCCATGAAGACATACAAGGGCATTAG	834	0.4029	MFSVFSYLAQAFGYAGIYYGSATLSTSMLNLVPGFTFLLAVLFRMEQLDWRKFSSQAKLLGTIVSIAGAFIVTLYKGPALLMGVSSVNSSQLPLLSEDSNWILAGVLLAADCIMASAYIIVQAYILKKYPAELIVVFFYCFFVGIQSGVTCLVVERDISAWSLEPKLRLLAVLYSGVFGSAFQVGVITWCLHQTGPVFISMFKPLGIVISVVLGFLFLGDAFYLGSLIGAIVIVVGFYSVLWGKAKDIEDVGVRSLESKGKQTPLLEENSHEDIQGH	277

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca03g01023	277	PANTHER	WAT1-RELATED PROTEIN	3	251	IPR030184	GO:0016021\|GO:0022857
	Cca03g01023	277	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	4	76	-	-
	Cca03g01023	277	Pfam	EamA-like transporter family	107	241	IPR000620	GO:0016020\|GO:0016021
	Cca03g01023	277	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	162	245	-	-
	Cca03g01023	277	PANTHER	WAT1-RELATED PROTEIN	3	251	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca03g01023	Cca-Chr3	25068140	25070589	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca03g01023	7	273	Nodulin-like Gene Family	AT5G40240	44.161	5.65e-74	229

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca03g01023	-		-	gmx:100804932	489.189

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