Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00979 ATGGCGCTTTGTAGAACTGGGCTGAACCCAATTCCGGGGTGTAACAGCTTAGCTTATTCAGCTCAAAATTTGTCGACAAAACTTGTTCTACCTGTTCCCCTGCGTTTTACTGGACAATTCTCTAATCTGGTCAGGAGAAACCGCAAGGGAGTGTGCTGCTTTTCTTTAAGGAATGCTGCATCTGCATCTTCTATGGAGTCACAGGAAGATGCTCCAAGTGCATTTTCCGTTTGCTTGGAGGAGGAACTGGATCATGTAATACGATTCAAAATGTCTGACTTCAAGATTTTAGATCGTGTTAGCATTGGCCTTGGTGGGCGGTCGGATGAGGTAGTTTTTGAAGGCACGGTGAAGGATAGTGGTAGCCCTTTGTATAACACAAGAGTTGTACTTCGACAGCTTTCTAGTGCTCAAGCTCAACGTAGAGGGAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGGCGTAAACTGCTTTATCATTCTTACTCGATGCAAGTTCACGGTTATGTCTCTTTGCCTGTAAATGTTGATAATAGTGGTTCATTTATCCTAGTCCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCCAACTTTAGAGGCCACTCTTGCACTGGATGAAGAATCTGTTAGGAAGGTAGGAGAAGATACAACTGGAGGTCCTGCAGTTTCTAGGCAGTTGCGACTTATTCGAATATTGATGAGGGATCTTCTTATTGGGGTAAATTACCTGCACAGCCACGGTCTTGCCCATACAGAGTTGAGGCTAGAAAATGTGCATATAAGTCCAATAGACAGACATATCAAAGTAGGTATATTGGGTAATGCTGCCGACTTTTACAAGGATGGTTCAAATAGTAGCTCTTTGGACAAGTTGGACAGGCGACAGATGATGATTGCATTTGACATGAGATGCATGGGCTTCATAATGGCTAAAATGGTAATGCGGGAACTTATGGATCCTTTGATTTATGCAAAGTTCAAATCGTTCCTCACAAAGGGGCATGATCCTTCATGTTTGCGAGAGTTTATGTTGGAAATTCTTGGCAGAAGTTCCGTGTATGGAAATGCTGGATTTCAAATCCTTGATAGGAACTGGGGAGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACTAAACCTTCTCAAAGGATAAGTTGTCTGGATGCTCTTAGACACCCATTCCTTTGTGGACCAAGATGGCGAGTAGTTCCGTCAATGGATATTATTAGATGGGGTCTGGGTTCTACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTGAGCCTCAGCGTAGCAGGCTTGCCCACTTCATTGACTTAATGGAGATGCTGAATCCCCATCCAAAGCCAAAGAACTGGCTGGAGCTGCTTCCAGGCAAATGGCGTCTATTATACTGCACTGGGAAGCATATCGGCCTGACCCTTCGGCAACCTCCTCTCCGAGCACTCGTTGGCAATGTGCACTTAACTGTGACAAGAGCATCAAAATTGAAAGCTAATCTTTCATTCGACTCCGACATTGGATTCTCTGTCATGGTTGGTCAGGACTGGCCTCATGACAAAGCAGGTAAGAGTGGAAGATTGCAGGTGAATTCTTCATTTACACTAACAGCCGGAAGACGGTTATATTTGAAGCAAGACAAGACCACAGAGAAGTTCTTCAGTGGCCCTTCCAGCAATGTGGAGGCTTTAGCTCAGAAATTTACAGGCAAGAAATGGAGAAAAATAATCCCTTTCAAGGAGTTTCCGTCAAGTCTTCCGGCAGCCAAGCTTGCATCAAGTGATATTGATGTGACGATGAATGTTGATGCTCCATTAAATCAAAACATTGATACTGCAAAAAATGTTCTACAAGAACTAAGAACACAAATTCCACCAGAAATATTTGATTTGTCAAAGCTTGTGTGTGGAACTTATGTGGACTCAAGGCTGCTTGTCCTCAGAGGGGTTAATGGATCTGCGCTCCTATTCACAAGGTCTTTTGTAGATAGAAACTTTTCTAGTTAG 2037 0.434 MALCRTGLNPIPGCNSLAYSAQNLSTKLVLPVPLRFTGQFSNLVRRNRKGVCCFSLRNAASASSMESQEDAPSAFSVCLEEELDHVIRFKMSDFKILDRVSIGLGGRSDEVVFEGTVKDSGSPLYNTRVVLRQLSSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYVSLPVNVDNSGSFILVHGYHGSFSLRHWLQQSDWLPTLEATLALDEESVRKVGEDTTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFYKDGSNSSSLDKLDRRQMMIAFDMRCMGFIMAKMVMRELMDPLIYAKFKSFLTKGHDPSCLREFMLEILGRSSVYGNAGFQILDRNWGAGWHLLSLLLATKPSQRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGSTAMRISEEYIYREPQRSRLAHFIDLMEMLNPHPKPKNWLELLPGKWRLLYCTGKHIGLTLRQPPLRALVGNVHLTVTRASKLKANLSFDSDIGFSVMVGQDWPHDKAGKSGRLQVNSSFTLTAGRRLYLKQDKTTEKFFSGPSSNVEALAQKFTGKKWRKIIPFKEFPSSLPAAKLASSDIDVTMNVDAPLNQNIDTAKNVLQELRTQIPPEIFDLSKLVCGTYVDSRLLVLRGVNGSALLFTRSFVDRNFSS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00979 678 Gene3D Transferase(Phosphotransferase) domain 1 231 407 - -
Cca03g00979 678 Pfam PAP_fibrillin 440 665 IPR006843 -
Cca03g00979 678 SMART serkin_6 94 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00979 678 ProSiteProfiles Protein kinase domain profile. 94 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00979 678 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED 64 671 - -
Cca03g00979 678 SUPERFAMILY Protein kinase-like (PK-like) 87 417 IPR011009 -
Cca03g00979 678 PANTHER CELL DIVISION PROTEIN KINASE 64 671 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Cca03g00979 PAP_fibrillin 4.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00979 - - ccaj:109796635 1331.24