Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00937 ATGGCTTTTACATCAATTGCTCCACAGTACTCATCTACACCATCTTTGCATTCTTTGGTACCTTCTTTAGAAGCCACACGCGATCATAACTCATGGTGGGGGAGAGTGAGATCATACAAATCCACGGGAAAAAGATCACTCCAACAGAATATCACAAGAGGCTTAACAATCCAGGGTGCAGCCACGAAACCAGCAAAGTCGCCAGCTGAAGAAGACTGGAAGATTAAGAGAGAGTATCTGCTGGAAAAAAGGGTAAGAAGTGTGGATGCAAAGGAAGCTCTGCGCCTTCAGAAGGAAAATAATTTTGTGATTCTCGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCCCATCCTCCAGATGCTATCAATGTGCAAATATATAGGCTTATAAAAGAGTGGACAGCATGGGACATTGCCAGACGGGCTGCATTTGCATTTTTTGGTATTTTTGCCGGGACTGAAGAGAACCCTGAGTTCATTCAGACTGTTGAAGCAAAATTAGATAAAAAGGCAAAGATAATAGTAGCTTGCTCGGCGGGAGGTACTATGAAACCAACACAAAATCTGCCCGAAGGTCAACAATCAAGGTCTCTCATAGCAGCTTACTTGCTGGTCCTTAATGGTTATACCAATGTCTTCCATCTTGAAGGTGGTCTTTACTCATGGTTTAAAGAGGATCTGCCAAGTGTTTCAGAGGAATGA 702 0.4345 MAFTSIAPQYSSTPSLHSLVPSLEATRDHNSWWGRVRSYKSTGKRSLQQNITRGLTIQGAATKPAKSPAEEDWKIKREYLLEKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIQTVEAKLDKKAKIIVACSAGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYSWFKEDLPSVSEE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00937 233 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 30 233 IPR043186 -
Cca03g00937 233 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 228 IPR036873 -
Cca03g00937 233 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 30 233 - -
Cca03g00937 233 CDD RHOD 92 222 - -
Cca03g00937 233 Pfam Rhodanese-like domain 90 223 IPR001763 -
Cca03g00937 233 ProSiteProfiles Rhodanese domain profile. 98 231 IPR001763 -
Cca03g00937 233 Gene3D - 83 232 IPR036873 -
Cca03g00937 233 SMART rhod_4 88 228 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00937 Cca-Chr3 23189625 23191580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00937 53 228 Sulfurtransferasese or Rhodanese AT4G27700 81.250 5.98e-106 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00937 - - gmx:100788147 429.483