Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00930 ATGGCTTCAGATCGGAAAGTTCACTCTTTTGAGGAGGTTGCAAAGCACAACCAGACCAAGGATTGCTGGCTTGTCATTTCTGGGAAGGTGTATGATGTCACCCCTTTCATGGAGGATCATCCCGGAGGTGACGAGGTTTTGTTATCTGCAACAGGGAAAGATGCAACCAATGATTTTGAAGATGTGGGACACAGTGATTCTGCTAGAGACATGATGGAAAAATACTATATTGGTGAGATTGATGCATCAACTGTCCCTGTAAAGAGGACTTATGTTCCACCTCATCAAGCACAGTACAATCCTGACAAGACTTCAGAATTTGTGATCAAGATTTTGCAGTTCCTGGTCCCTCTCCTCATATTGGGCTTGGCCTTTGTTGTCCGGCACTACACCAAGAAAGAGTAG 405 0.4469 MASDRKVHSFEEVAKHNQTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSARDMMEKYYIGEIDASTVPVKRTYVPPHQAQYNPDKTSEFVIKILQFLVPLLILGLAFVVRHYTKKE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00930 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Cca03g00930 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cca03g00930 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cca03g00930 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cca03g00930 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cca03g00930 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cca03g00930 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cca03g00930 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 92 IPR036400 -
Cca03g00930 134 Gene3D - 1 86 IPR036400 -
Cca03g00930 134 PANTHER CYTOCHROME B5 1 132 - -
Cca03g00930 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Cca03g00930 134 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00930 Cca-Chr3 22997896 23001364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00930 1 134 NADPH P450 reductases AT5G53560 82.090 8.61e-84 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00930 K23490 - gmx:100305929 265.388