Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00923 ATGGTTCCAAAACAAAAGGGCAAGGTGGAAATCAAACGTATAGAGCAAGAGTTCAGGAAACTCAAAGATGAATATGACAATTTAGCATCAAGGTTTAAGTCCTTAAAGAAAGAGAAGGAGTTTTTGCAATTAGAGTTGGAGAGGCTAAGTGATTTGGTGATAACATCTCATGATGGTGGAAGGAAAAACAAGGGTGCCAAAGAAAACAACATTGGAGATTATGACCAAAATGAGAATAACATCATAAGGGGCGAGAAATATGAGGACAAAGAACACCAACTTCTTAGAATGGATGATGACCATGAAGAGATGCCATTGGCATCACTTGAGAAGTGGTATAGTATTATGGACCACAGTGGCATCTTGGACCAACCATGTAGCAATTCTCAATGGTTGGACTTCTGGACTTGA 411 0.3917 MVPKQKGKVEIKRIEQEFRKLKDEYDNLASRFKSLKKEKEFLQLELERLSDLVITSHDGGRKNKGAKENNIGDYDQNENNIIRGEKYEDKEHQLLRMDDDHEEMPLASLEKWYSIMDHSGILDQPCSNSQWLDFWT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00923 136 Coils Coil 4 52 - -
Cca03g00923 136 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 10 136 - -
Cca03g00923 136 MobiDBLite consensus disorder prediction 57 82 - -
Cca03g00923 136 Pfam Homeobox associated leucine zipper 12 52 IPR003106 GO:0006355|GO:0043565
Cca03g00923 136 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 10 136 IPR045224 GO:0003700
Cca03g00923 136 MobiDBLite consensus disorder prediction 57 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00923 5 136 Homeobox Transcription Factor Family AT3G61890 27.778 3.28e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00923 K09338 - gmx:100793260 172.94