Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00919 ATGAAATTTCAGGTTATTGAATTTGTTAAGGGACATGTTAATGCATACACACCTCTCTTGGCCGGAAATTCAATATATGTTGATTTTCAATTTCTGAAGAATTTTCTTTTTGTCTCAAAAGATGAGGATTCTGTGATGAAAGTCATTGATTTTGGGCTATCTGATTTTGTTAGACCAGATCAACGCCTCAATGATATTGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGGAGACTTATGGAGTATTGGAGTTATATCATACATATTGTTATGTGGAAGTAGACCATTTTGGGCACGCACTGAATCAGGAATTTTCCGGTCTGTGTTAAGAGCGAATCCTAATTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTGAAGAGACTTCTGAACAAGGACCACAGGAAAAGGATGACTGCTGCTCAAGCTTTAGCTCACCCATGGTTGAGAAATGAAAAAAATCCTATTCCTTTAGATATTTCGATTTACAAGTTAGTAAAGTCATACGTGCGTGCCTCACCGTTGAGACGCGCTGCGTTGAAGGCTCTCGCAAAAGCATTGACAGAAGACGAGCTAATCTACCTTAGAGCGCAGTTTAACCTCTTGGAGCCTAAAGAAGGCTACATTTCGCTCGAGAATTTTAGAGTTGCTCTCATGAAAAATGCAACTGATGCCATGAAGGAATCAAGGGTCCCTGACATTTTAAATTTGATGGAGCCACTCTCCTATAAAAAAATGGACTTCGATGAGTTTTGCGCTGCTGCAATCAGTGTATACCATCTGGAAGTTCACCAAGAATGGGATAGAATCGCTACCACAGCTTTTGAGTATTTTGAGGAGACAGGAAACCGAGTCATTTCAGTTGAGGAGTTGGCTCAGGAGATGAATTTGGGTCCATCAGCTTACTCTTTTATTGGTGACTGGATCAGAAAATCTGATGGAAAACTCAGCTTGGTCGGATATACAAAGTTTTTGCATGGTATCACGGTGCGTAGTTCAAATACAAGACACCGACAGCTAGGATAA 1068 0.4045 MKFQVIEFVKGHVNAYTPLLAGNSIYVDFQFLKNFLFVSKDEDSVMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALAHPWLRNEKNPIPLDISIYKLVKSYVRASPLRRAALKALAKALTEDELIYLRAQFNLLEPKEGYISLENFRVALMKNATDAMKESRVPDILNLMEPLSYKKMDFDEFCAAAISVYHLEVHQEWDRIATTAFEYFEETGNRVISVEELAQEMNLGPSAYSFIGDWIRKSDGKLSLVGYTKFLHGITVRSSNTRHRQLG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00919 355 Gene3D - 202 270 - -
Cca03g00919 355 SMART serkin_6 3 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00919 355 SUPERFAMILY EF-hand 195 340 IPR011992 -
Cca03g00919 355 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 346 - -
Cca03g00919 355 SUPERFAMILY Protein kinase-like (PK-like) 34 177 IPR011009 -
Cca03g00919 355 Gene3D Transferase(Phosphotransferase) domain 1 31 180 - -
Cca03g00919 355 Pfam Protein kinase domain 33 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00919 355 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00919 355 Gene3D - 181 325 - -
Cca03g00919 355 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 33 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00919 Cca-Chr3 22787500 22792326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00919 33 352 EF-hand Containing Proteins AT2G46700 71.340 1.72e-165 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca03g00919 Pkinase 4.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00919 - - var:108331904 604.749