Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00918 ATGGGGCATTGCTGCAGCAAAAACATCGCCGTCAACAACGAGGCGGTGAGCGCCGATCACCGCCCCAAGACGCCGCATTATGGGCCGGCGTCGCCGCCGCCGGCCACGGGGAGTTCGGTCTCCGGCGCGACGCCGGGGAGGAACACGCCGGCGCACTCGTTTTCGACGAGTCCGTTTCCGAGTCCTCTCCCGCCGGGGGTGGCGCCTTCGCCGGCGAAGACGCCGGGGAGGAAGTTCCGGTGGCCGTTGCCGCCGCCCTCGCCGGCGAAGCCGATCATGGCGGCGCTTCTGCGGCGGCAGGGGAAGGCGAAGCCGAAGGAAGGGCCGATACCGGAGGAGCAGGGGGAGGGCGGGGAGGGAGAGAGGTCGCTCGATAAGAGCTTCGGTTATGGGAAGAATTTTGGGGCAAAGTTTGAGTTGGGGAAGGAAGTGGGTCGAGGGCATTTTGGTCACACTTGTTGGGCCAAAGGGAAGAAGGGTGACCTTAAGGGGCAATCTGTTGCTGTGAAAATCATATCCAAAGCTAAGATGACTTCAGCAATAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAGGGCTTATCTGGACATAAAAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTCAACAACGTCTATATTGTTATGGAGCTGTGCGAGGGTGGAGAATTACTTGACAGAATTCTAGATAGGTAA 705 0.5759 MGHCCSKNIAVNNEAVSADHRPKTPHYGPASPPPATGSSVSGATPGRNTPAHSFSTSPFPSPLPPGVAPSPAKTPGRKFRWPLPPPSPAKPIMAALLRRQGKAKPKEGPIPEEQGEGGEGERSLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGDLKGQSVAVKIISKAKMTSAIAIEDVRREVKMLKGLSGHKNLVKFYDAFEDVNNVYIVMELCEGGELLDRILDR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00918 234 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Cca03g00918 234 Pfam Protein kinase domain 138 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00918 234 ProSiteProfiles Protein kinase domain profile. 138 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00918 234 Gene3D Transferase(Phosphotransferase) domain 1 131 234 - -
Cca03g00918 234 PANTHER CDPK-RELATED KINASE 6 45 234 - -
Cca03g00918 234 MobiDBLite consensus disorder prediction 34 56 - -
Cca03g00918 234 MobiDBLite consensus disorder prediction 57 71 - -
Cca03g00918 234 MobiDBLite consensus disorder prediction 15 122 - -
Cca03g00918 234 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 234 - -
Cca03g00918 234 MobiDBLite consensus disorder prediction 100 122 - -
Cca03g00918 234 SUPERFAMILY Protein kinase-like (PK-like) 130 233 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00918 Cca-Chr3 22785002 22787398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00918 49 234 EF-hand Containing Proteins AT3G50530 63.830 1.58e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca03g00918 Pkinase 7.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00918 - - var:108331904 397.512