Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00912 ATGATGTATGTTAAACTTATTTTACTCCTATGTTTTTTACTTCATCATTTTAATGACATACTGTGCAACAATGACACAGACAGAGATGCCCTTCTTTCTTTCAAATCCCAAGTGAGTGACCCAAAAAGTGCTTTCTCTGACTGGTCTACACATTCGAATCACTGCACTTGGAATGGTGTAACCTGCTCCAAAGTTGGAAACAGGGTTCAATCTCTCACTTTACCATCAGTTGGCCTCTTTGGCAAACTACCCCCTCAGCTTTCCAACCTCACATACTTGCACACACTTGACCTTTCCAACAACAGTTTTCATGGCCCAATTCCCCCAGAGTTTGCCCATCTATCGCTTCTCAATGAGATCAAATTACCTTACAACAATCTCAGTGGTACACTTCCACAACAGCTGGGCCATCTCCACCGTCTACAAATTTTAGACTTTTCAGTCAACAATCTCACAGGTAAAGTCCCTCCATCATTTGGAAATCTCTTTTCTCTTAAGAATCTTTCCTTGGCAAGGAACGGTTTTGTGGGTGAGATTCCAAGTGAACTTGGTAATCTCCACAATCTTTCCTATCTTCAACTCTCAGTGAACAATTTCTCAGGCCAGTTTCCCACTTCTATCCTCAACATCTCTTCCTTAGTCTTCTTATCTGTCACACAAAACAATCTATCTGGCAAGTTACCACAAGATTTTGTCCATGCCCTTCCAAATTTAATCTTTCTGTCTCTGGCAACCAATAGGTTTGAAGGGGTAATTCCGAATTCAATATCCAATGCCACAAATCTTCAACACATTGACCTTGCTAACAACAAGTTTCACGGCCCCATACCTCTATTCTACAACTTCAAATACCTTACCTACCTCGTTCTTGGTAATAATTTTCTCTCTTCTACGACGTCGTTGAATTTTCAGTTCTTTGATTCCCTTACAAACTCCACCCAGCTACAAATTCTCATGATCAATGATAACCATTTGGCCGGGGATCTTCCAAGCTCTGTTGCTAATCTGTCTGGCACTCTCCAACAATTCTGTGTTGCTAACAATTTGCTAACCGGTGCCATTCCTCAAGGAATGAAGAAATTTCAAAATCTCATATCCTTGTCTTTCGAAAACAACTCTTTCACGGGAGAGTTACCATCAGAAATAGGAGCACTACATAATCTACAGCAACTTGTGATATATAGCAATAGATTATCTGGAGAAATTCCAGACATTTTTGGCAATTTCACCAATATGTATATTCTTGCAATGGGAAATAACCAGTTCTCGGGTAGAATTCACCCGAGTATTGGACAATGCAAGAGATTAACTTTTCTTGACCTGGGGATGAATAGGCTTGGTGGGACCATACCAAAGGAGATTTTTCAACTTTCTGGTTTAACAAAATTGTATTTAGAAGGAAACTCTCTGCATGGTTCACTTCCTCATGAAGTCAGCATCATGACACAGATTGAAACCATAGTTCTTTCTGGCAACCAGTTGTCAGGGAACATTCCTGTGGAAATAGAGGATTGTTCTAGCTTGAAGAAACTTGTGATGGCAAGAAACAAATTCAATGGCTCAATCCCAACTAATCTTGGGAATTTAGCATCCCTTGAGACTTTGGATTTATCATCAAACAATCTCACTGGCCCTATTCCTCAAAGTTTAGAAAAGCTCCAGTATATAGAGAGATTAAATTTGTCTTTCAACTATTTGGAAGGGGAAGTGCCTGTGAAAGGTGTTTTTATGAACCTTACCAAGCTTGATCTTCAGGGTAACAACCAACTGTGTAGCCTTAACATGGAAATTGTGCAGAATTTGGGTGTACTCCTGTGTGTTGGTAAAAAGAAAAGAAAGATTTTACTCCCTATCATCCTTGGAGTTGTTGGTGCTACTGCTTTGATCATTTCAATGCTCTTGCTAATTTGCACCATGATGTACCGAAAGAAAAGAAAGGAGGCGAAAACCAGGGTGCCATCTGCCCCTCTCAGAGGATTGCCTCAAAATATATCTTATGGTGATATTCGGATTGCAACAAATAATTTTGCAGCTGAAAATTTGATTGGAAAAGGAGGCTTTGGCTCTGTGTATAAGGGTGTATTCAGCTTCAGCACTGGTGAAACCGCCACCCTTGCTGTCAAAGTCCTGGACCTACAACAAAGCAAAGCTTCTAAAAGTTTTAATGTTGAATGTGAAGCTTTGAAAAATGTTAGGCACCGGAACCTAGTGAAGGTTATCACTTCTTGCTCTAGCCTTGATTATAAAGGAGAGGAGTTCAAGGCCCTTGTTATGCAATTCATGGCCAATGGTAACTTGGATGCAAGTCTATACCCAGAAGATGTTGAGTCAGGATCTTCTTTAACCTTGTTGCAAAGATTGAACATTGCCATTGATGTTGCTTCTGCTATGGACTACTTGCACCATGACTGTGATCCACCAATAGTGCATTGCGATTTGAAACCTGCCAATGTGCTTCTGGATGAAAATATGGTTGCACATGTTGCAGATTTTGGTTTGGCAAGGTTTACATCTCAAAGTACACCAGAGAAGCAGAGTAGTACTCTGGGACTGAAGGGATCCATTGGCTATATTGCCCCAGAATATGGTGTAGGAGGCAAGGCTTCAACTCATGGCGACGTGTACAGTTTTGGAATTCTACTGCTAGAGATGTTCACAGGCAAAAGACCAACTGAAGAGATGTTCAAAGAAGGATTAGGCCTAAGGAAATTTGTCTCAACCATGGAAGAGGATCAAGTAGTGAGGGTTGCTGATCGAAGGCTTATTGATGATTATGAATATTCAACACAAAGCTCAAGCACTGGTGACCATAGCAGTAGTAGCATTGGTGACAACACACATAGAACATGCAAAGCAGAGGAATGCGTAGCTGCAGTGATAAGAATTGGGTTGTGTTGCATAGCTCATAAACCAAAAGATCGTTGGAGGATGAGAGATGTCTCAACAAAATTGCAAGCAACTAGGCATTCTCTGCTGGCCTTGTGA 2985 0.408 MMYVKLILLLCFLLHHFNDILCNNDTDRDALLSFKSQVSDPKSAFSDWSTHSNHCTWNGVTCSKVGNRVQSLTLPSVGLFGKLPPQLSNLTYLHTLDLSNNSFHGPIPPEFAHLSLLNEIKLPYNNLSGTLPQQLGHLHRLQILDFSVNNLTGKVPPSFGNLFSLKNLSLARNGFVGEIPSELGNLHNLSYLQLSVNNFSGQFPTSILNISSLVFLSVTQNNLSGKLPQDFVHALPNLIFLSLATNRFEGVIPNSISNATNLQHIDLANNKFHGPIPLFYNFKYLTYLVLGNNFLSSTTSLNFQFFDSLTNSTQLQILMINDNHLAGDLPSSVANLSGTLQQFCVANNLLTGAIPQGMKKFQNLISLSFENNSFTGELPSEIGALHNLQQLVIYSNRLSGEIPDIFGNFTNMYILAMGNNQFSGRIHPSIGQCKRLTFLDLGMNRLGGTIPKEIFQLSGLTKLYLEGNSLHGSLPHEVSIMTQIETIVLSGNQLSGNIPVEIEDCSSLKKLVMARNKFNGSIPTNLGNLASLETLDLSSNNLTGPIPQSLEKLQYIERLNLSFNYLEGEVPVKGVFMNLTKLDLQGNNQLCSLNMEIVQNLGVLLCVGKKKRKILLPIILGVVGATALIISMLLLICTMMYRKKRKEAKTRVPSAPLRGLPQNISYGDIRIATNNFAAENLIGKGGFGSVYKGVFSFSTGETATLAVKVLDLQQSKASKSFNVECEALKNVRHRNLVKVITSCSSLDYKGEEFKALVMQFMANGNLDASLYPEDVESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPANVLLDENMVAHVADFGLARFTSQSTPEKQSSTLGLKGSIGYIAPEYGVGGKASTHGDVYSFGILLLEMFTGKRPTEEMFKEGLGLRKFVSTMEEDQVVRVADRRLIDDYEYSTQSSSTGDHSSSSIGDNTHRTCKAEECVAAVIRIGLCCIAHKPKDRWRMRDVSTKLQATRHSLLAL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00912 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Cca03g00912 994 SUPERFAMILY L domain-like 25 296 - -
Cca03g00912 994 Gene3D Ribonuclease Inhibitor 135 231 IPR032675 -
Cca03g00912 994 SMART serkin_6 676 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00912 994 ProSitePatterns Protein kinases ATP-binding region signature. 682 708 IPR017441 GO:0005524
Cca03g00912 994 SMART LRR_typ_2 138 161 IPR003591 -
Cca03g00912 994 SMART LRR_typ_2 457 481 IPR003591 -
Cca03g00912 994 SMART LRR_typ_2 162 186 IPR003591 -
Cca03g00912 994 SMART LRR_typ_2 90 113 IPR003591 -
Cca03g00912 994 SMART LRR_typ_2 235 258 IPR003591 -
Cca03g00912 994 SMART LRR_typ_2 529 553 IPR003591 -
Cca03g00912 994 SMART LRR_typ_2 385 408 IPR003591 -
Cca03g00912 994 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Cca03g00912 994 Pfam Leucine Rich Repeat 93 114 IPR001611 GO:0005515
Cca03g00912 994 ProSiteProfiles Leucine-rich repeat profile. 531 554 IPR001611 GO:0005515
Cca03g00912 994 ProSiteProfiles Protein kinase domain profile. 676 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00912 994 Gene3D Phosphorylase Kinase; domain 1 659 760 - -
Cca03g00912 994 CDD STKc_IRAK 682 985 - -
Cca03g00912 994 SUPERFAMILY L domain-like 340 595 - -
Cca03g00912 994 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Cca03g00912 994 SUPERFAMILY Protein kinase-like (PK-like) 654 984 IPR011009 -
Cca03g00912 994 Gene3D Ribonuclease Inhibitor 232 600 IPR032675 -
Cca03g00912 994 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Cca03g00912 994 PANTHER RECEPTOR-LIKE PROTEIN 55 1 88 - -
Cca03g00912 994 PANTHER RECEPTOR-LIKE PROTEIN 55 84 165 - -
Cca03g00912 994 PANTHER RECEPTOR-LIKE PROTEIN 55 163 984 - -
Cca03g00912 994 Gene3D Ribonuclease Inhibitor 25 134 IPR032675 -
Cca03g00912 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 163 984 - -
Cca03g00912 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 88 - -
Cca03g00912 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 84 165 - -
Cca03g00912 994 Pfam Protein tyrosine and serine/threonine kinase 679 982 IPR001245 GO:0004672|GO:0006468
Cca03g00912 994 Gene3D Transferase(Phosphotransferase) domain 1 761 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00912 Cca-Chr3 22600726 22604102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00912 15 989 Receptor kinase-like Gene Family AT3G47570 41.543 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Cca03g00912 PK_Tyr_Ser-Thr 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00912 - - gmx:100776054 1594.71