Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00855 ATGGATAAATTTCAGAGAACTAAGAAAGTGTTGATTTTTTCAATGGTGGTATTGGTTATACTTCCAACTCTAGTTGCTTCCAAGTGCACATGCGACGAAGAAGACGAAGAACGCGACAAAGGGAAAGCCCTAAGGTACAAAATAGCAGCTTTGGTGTCAATACTAATAGCTAGTGCAATTGGGGTGGTTATTCCACTCCTTGGAAAGATTATACCCGCGTTGAGTCCCGAGAAGGACGTTTTCTTCTTCGTGAAGGCCTTCGCTGCGGGTGTGATATTAGCCACCGGCTTCATTCACGTTCTACCAGATGCCTTTGAAAACTTAACTTCGCCTTGTTTGAAAGAGCATCCATGGAGCGATTTTCCCTTCACTGGCTTCGTGGCCATGTGCACTGCCATGGGGACCCTCATGGTTGAGACTTATGCCACTGCTTATTTTCAAAAGCAAAACTTCAAAGGGACACGAGTTGTGGAGGAGGCCACTGATGTCGAGAAGGAACATGGCCATGAAGGAAATGTGCATCTTCACACACATGCAActcatggtcatgcacatggtcatgtttcttctcatgatcatTCCTCCGAACTTCTTCGTCATCGAGTCATATCACAGGTGTTGGAGCTTGGAATTATAGTTCATTCTGTCATCATTGGAATTTCTCTGGGAGCTTCAGAGAGTCCCAAAACAATAAGACCACTGGTAGCTGCGTTGACTTTTCATCAGTTCTTTGAGGGCATGGGACTTGGAAGTTGTATATCTCAGGCAAATTTCAAGAAGCTATCTGTGACAATAATGGGATTGTTCTTTGCTTTAACAACTCCTGTGGGGATTGGAATAGGCATAGGGATCACTAATGTTTACGATGAAAGCAGTCCAACTGCCCTAATTGTGGAAGGAATCTTCAATGCAGCATCTTCAGGGATCTTAATCTATATGGCTCTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAAAAAAGTGGTAGTCTCCGATTAGGGGCCAATATCTCTCTTCTCTTTGGAGCTGGTTGTATGTCTCTTTTAGCTAAATGGGCTTAA 1071 0.4183 MDKFQRTKKVLIFSMVVLVILPTLVASKCTCDEEDEERDKGKALRYKIAALVSILIASAIGVVIPLLGKIIPALSPEKDVFFFVKAFAAGVILATGFIHVLPDAFENLTSPCLKEHPWSDFPFTGFVAMCTAMGTLMVETYATAYFQKQNFKGTRVVEEATDVEKEHGHEGNVHLHTHATHGHAHGHVSSHDHSSELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCISQANFKKLSVTIMGLFFALTTPVGIGIGIGITNVYDESSPTALIVEGIFNAASSGILIYMALVDLLAADFMNPRMQKSGSLRLGANISLLFGAGCMSLLAKWA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00855 356 PANTHER ZINC TRANSPORTER 1 17 356 - -
Cca03g00855 356 Pfam ZIP Zinc transporter 46 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca03g00855 356 TIGRFAM zip: ZIP zinc/iron transport family 29 356 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca03g00855 356 PANTHER ZINC/IRON TRANSPORTER 17 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00855 Cca-Chr3 20694305 20698505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00855 4 356 Inorganic Solute Cotransporters AT3G12750 53.652 3.23e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00855 K14709 - gmx:547695 526.939