Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00850 ATGACGGAGCACCAGGTAGCGAAACTGATGGAGGAGGACATGGGTTCCGCCATGCAGTACCTTCAAGGCAAGGGCCTTTGCCTCATGCCCATTTCCCTCGCCACGGCCATCTCCACTGCCACGTGTCACTCCAGGAACCCCTTGATCACCGCCGCCTCCGCCGGCAACCAGATTCCGACCAACGCCGCCCACGCGAACCCCGCAGCCGCGTCCAACGGCGAAGGGCCGTCGTCCCCGAGCATGTCCGTGCTGACGGTGCAGTCGGCCGTGGTGGGCAATGACGGCGCCGTCAAGGACGCTGCCTCCGTTTCGAAGCCGTGA 321 0.6511 MTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLITAASAGNQIPTNAAHANPAAASNGEGPSSPSMSVLTVQSAVVGNDGAVKDAASVSKP 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00850 106 PANTHER BNAA09G41470D PROTEIN 1 62 - -
Cca03g00850 106 MobiDBLite consensus disorder prediction 59 86 - -
Cca03g00850 106 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00850 Cca-Chr3 20441323 20441643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00850 1 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 56.557 1.38e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00850 - - cit:102625435 158.688