Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00796 ATGGAAGTGCAGGTGATAATTTTGTGCAGCGTTTTGCTTGCGTGGGTCTCGGTGGCTAGGGCAAAGGTTGGGGCGATGGTGGTGTTCGGGGACTCGTCGGTTGATGCGGGGAACAACAATTACATAGCGACGGTTGCACGCAGCAATTTCGAGCCATATGGGCGTGACTTTGAGGGTGCGAAGCCAACTGGGAGATTCAGCAATGGACGAATAGCCACTGATTTCTTGGCTGAAGCCTTTGGAATCAAACCCTACGTGCCACCATACTTGGACCCTCGTCATAACATTTCCCACTTTCTCACTGGGGTCACCTTTGCTTCTGCTGCTACTGGCTACGACAATGCTACCTCCGATGTGCTTTCTGTGATACCATTATGGAAGCAGTTGGAGTACTACAAAGGGTACCAAAAGAAGCTGAGAGTGTATCTTGGAGAAAGTAGGGCACATGAGACAATTGCCAAAGCATTGCACATAATAAGTCTTGGAACAAACGACTTCCTAGAGAACTATTATGCAATCCCTGGTAGAGCATCACAGTATACACCAAGAGAGTATCAAAATTTTCTTGCTGGAATAGCTGAGAATTTCATCCACAAACTCTATGCTCTTGGTGCAAGAAAAATATCCTTAGGGGGTTTACCTCCTATGGGGTGCTTGCCTCTGGAGAGAACCACAAATTTTGTTGGTGGAAATGACTGTGTGCCAAGTTACAATAACATTGCATTAGAGTTCAATGCCAAACTCACTAAGTTGACAACGAGGCTGAACAAAGATCTTCCTGGGATCAGATTGGTATTTTCAAATCCGTATGATATTATGTTGCAAATTATTAAAAAGCCAGCTCAGTATGGGTTTCAAGTGACCTCAATGGCATGTTGTGCTACTGGAATGTTTGAGATGGGATACGCATGCAGCAGGGCCAGTTCTTTCAGTTGCATAGATGCTTCCAAATATGTATTTTGGGACTCATTCCATCCAACGGAGAAAACCAATGGTATCATTGCAAAGTACCTCGTAAAGAACGTATTAGCTCCATTTTTGCATTAA 1047 0.4441 MEVQVIILCSVLLAWVSVARAKVGAMVVFGDSSVDAGNNNYIATVARSNFEPYGRDFEGAKPTGRFSNGRIATDFLAEAFGIKPYVPPYLDPRHNISHFLTGVTFASAATGYDNATSDVLSVIPLWKQLEYYKGYQKKLRVYLGESRAHETIAKALHIISLGTNDFLENYYAIPGRASQYTPREYQNFLAGIAENFIHKLYALGARKISLGGLPPMGCLPLERTTNFVGGNDCVPSYNNIALEFNAKLTKLTTRLNKDLPGIRLVFSNPYDIMLQIIKKPAQYGFQVTSMACCATGMFEMGYACSRASSFSCIDASKYVFWDSFHPTEKTNGIIAKYLVKNVLAPFLH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00796 348 Gene3D SGNH hydrolase 16 345 IPR036514 -
Cca03g00796 348 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 346 - -
Cca03g00796 348 PANTHER GDSL ESTERASE/LIPASE EXL3 5 346 - -
Cca03g00796 348 SUPERFAMILY SGNH hydrolase 158 340 - -
Cca03g00796 348 CDD SGNH_plant_lipase_like 25 338 IPR035669 -
Cca03g00796 348 Pfam GDSL-like Lipase/Acylhydrolase 27 338 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00796 Cca-Chr3 17562604 17566026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00796 25 342 Pollen Coat Proteome AT1G75910 36.533 1.38e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00796 - - gmx:100820032 627.091