Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00788 ATGGGGGAGAGAAGGAACGGAAAAGGTAGCGTGAGCTTAGAGGGAGAGAAGGTGATATTGGTCCCTTACATGGAGGCCCACGTGCCCAAATATCACGAATGGATGAAGGACCCTTCTCTCCTTCAAGCCACTGCCTCCGAGCCCCTCACGCTCCAACAGGAGTACCACATGCAACTCTCCTGGTCCCAAGACCCTAACAAGGAGACCTTCATTGTGCTGGACAAGGACTTGGTTCTTGGCGATTTCTCCCACGGGGAACCCCACCTTGAAGCAATGGTTGGTGATGTAAATATATTTATGAATGATTTGGATAATCCTCATGTGGCAGAGGTTGAAATTATGATAGCTGAACCAAAGAGCCGTAGGAAAGGACTTGCAAAGGAGTCTGTTCTGATGATGATGACCTTTGCTATCAAGAAGTTAGGAATTACTAGCTTTCAAGTTAAAATTGGAGACTCCAATGGAGCATCACTTGACCTGTTCCAAAAATTGGGGTTTGTGGAAACTTCATATAGCAGCATCTTCAAGGAGGTCACTTTGGAGTTGCAAATAACACAGCCCAAGAAGGAGGAGATGCTTGGTTTAATGGGTACTGTGATCAAACATACATAA 612 0.4575 MGERRNGKGSVSLEGEKVILVPYMEAHVPKYHEWMKDPSLLQATASEPLTLQQEYHMQLSWSQDPNKETFIVLDKDLVLGDFSHGEPHLEAMVGDVNIFMNDLDNPHVAEVEIMIAEPKSRRKGLAKESVLMMMTFAIKKLGITSFQVKIGDSNGASLDLFQKLGFVETSYSSIFKEVTLELQITQPKKEEMLGLMGTVIKHT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00788 203 PANTHER N-ACETYLTRANSFERASE 9 10 195 IPR039135 GO:0008080
Cca03g00788 203 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 169 IPR016181 -
Cca03g00788 203 Pfam Acetyltransferase (GNAT) domain 18 167 IPR000182 GO:0016407
Cca03g00788 203 Gene3D - 7 174 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca03g00788 Acetyltransf_3 1.3e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00788 K25762 - gmx:100817900 362.073