Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00782 ATGCAGGCTGAAGACGGTGTTGGTATCCCTGAGCAAATTCTTGATTCATCAAACTTCCAAAGTTATGCAAGATTTTATTTTATATTCACCAAATGCAATCTCATCTGGTCTCTCAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTGTATGGTGTAAAAAGCTTACCACAAATTCTTGCAATGATAGAGAGTATTTCTTTTTGGGACAATTGCCGTATCTGACTGATGCAGAATGTCTTATTTATGAGGGAATAACTGTTGTTTTGCTAATCGCACATACGTTCTTCCCATTGGCATATGAAGGATCCCGTATATATTGGAAAAATATCATTAATCAATTGAAGGTTTTCTTTCTACTAGTTCTTGTCGCTGATATGCTGGTCTATGCCCTTTATTTGTCTCCACTGGCTTTTGATTTTCTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCATTATGAATATTAGGGAGCTACGAGAAACTATCGTTATCTTGGCCGGGATGCTTGATACATACTTAAATATCTTGGCTTTGTGGCTTCTATTTCTTCTTTTTTCTAGTTGGGTGGCGTATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACATTTTATCAGCTGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCCCGATGGTATTGCCTGTTTTTCGTACTCTTTGTGCTAGTGGGGGTGTACTTTGTTACAAACTTGATCCTTGCTGTTGTTTATGACAGTTTCAAGAATGAGCTTGTAAAACAAGTTTTTGAGATGGATCGTATGAGAAGAACCATGTTGGAGAAAGCTTTTTATCTCTTAGATACACATAAAAGAAGACACCAAAGAAGTTAA 921 0.3659 MQAEDGVGIPEQILDSSNFQSYARFYFIFTKCNLIWSLSYFALIVLNFLEKPVWCKKLTTNSCNDREYFFLGQLPYLTDAECLIYEGITVVLLIAHTFFPLAYEGSRIYWKNIINQLKVFFLLVLVADMLVYALYLSPLAFDFLPFRIAPYIRVVLFIMNIRELRETIVILAGMLDTYLNILALWLLFLLFSSWVAYVFFEDTIQGKTVFTSYGTTFYQLFLLFTTSNNPDVWVPAYKSSRWYCLFFVLFVLVGVYFVTNLILAVVYDSFKNELVKQVFEMDRMRRTMLEKAFYLLDTHKRRHQRS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00782 306 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 302 IPR044581 GO:0005245
Cca03g00782 306 Pfam Ion transport protein 91 272 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cca03g00782 306 Gene3D - 170 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00782 Cca-Chr3 17155896 17159599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00782 3 300 Ion Channels AT4G03560 67.785 1.48e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00782 K16900 - ccaj:109811715 585.489