Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00747 ATGGAACAGTTTAAGATTCTTTTTGTTTTTCTCCTCACTCTGCTACTTGTGCTCAAGCTCGCACTCTCGCTCTGGTGGAGACCAAGAAAAATTGCCAGACATTTCTCCAAGCAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAATGTTAAGGAACTCGTGGGACTCATGATGAAAGCTTCCTCTCAACCCATGCCTTTCTCTCACAACATTCTCCCTAGAGTCCTCTCCTTCTACCATCACTGGAAGAAAATTTACGGTACTTCAACATTTCTTGTTTGGTTTGGACCCACTGTTCGAGTCACCATCTCTGATCCAGACCTCATCAGGGAAATCTTCACCACCAAATCAGAATTCTATGAGAAAAACGAATCTCCCCCACTTGTGAAGCAGCTCGAAGGTGATGGACTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACAGAAGAATCATCTCTCCCACCTTTCACATGGAAAATCTCAAACTCTTGATTCCGATTATGGCAACAAGCGTGGTTGAGATGTTGGAGAAGTGGAAGGCAATGGCAGAAAAGGGTGAGGTGGAAATCGAAGTTTCGGAATGTTTTCAAACGTTAACAGAAGATGTGATCACTAGGACAGCGTTTGGAAGTAGCTACGAAGATGGAAAAGCCGTTTTCCGGTTACAAGCCCAACAAATGGTCCTTGCAGCCGATGCCTTCCAAAAGGTGTTCATTCCAGGTTACAGATTCTTGCCCACGAGGAGGAACATAAATTGTTGGAAATTGGAGAAGGAGATGAAGAAATCGTTGGTGAAGCTGATCGATAGAAGAAAAGAGAATGCGTGTGGGAAAGAGGAAAAAAAAGGAGCGAAGGATTTGCTGGGGATTATGATTGGGGCTTCAAACACCACCTCGAACGTGAGCGTAACGGTGGATGACATAGTGGAAGAGTGCAAGACGTTTTTCTTTGCAGGCAAACACACCACTTCGAACCTGCTGACGTGGACGACGATTCTGCTTGCGATGCACCCTGAGTGGCAGGTACGGGCACGTGAGGAGCTGCTGAGTGTGTGCGGGGCACGTGACGTTCCCACCAAGGACGACCTTGCCAAGCTTAAGACACTGACAATGGTCGTGAACGAGTCCCTAAGACTGTACCCTCCCACAATCGCAACCATAAGAAGGGCAAAAGCTGACGTGGAGCTAGGGGAGTACAAGATCCCGTGCGGGACGGAGCTCCTGATCCCCATAGTGGCCGTTCATCACGATCAGGCCACGTGGGGCAGCGACGCGAGTGAGTTCAATCCTGGCCGTTTCTCCAACGGCGTGTCCCGCGCAGCGCAACACCCTTTCGCCTTCATCCCCTTTGGCCTCGGTGTGCGCACATGCATCGGACAAAACCTCGCAATTCTTCAAACCAAACTCGCCCTTGCGATCATGCTTCGCGGTTTTAGTTTCAGGCTGGCCCCAAGCTATCGCCACGCACCAACGGTCCTCATGCTGCTCTACCCTCAATACGGTGCGCCAATACTTTTCCAACGCGTATCCACAACCGCCACTACTTTGGGTTCTACCTGA 1566 0.4955 MEQFKILFVFLLTLLLVLKLALSLWWRPRKIARHFSKQGIRGPPYRFFIGNVKELVGLMMKASSQPMPFSHNILPRVLSFYHHWKKIYGTSTFLVWFGPTVRVTISDPDLIREIFTTKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPIMATSVVEMLEKWKAMAEKGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMVLAADAFQKVFIPGYRFLPTRRNINCWKLEKEMKKSLVKLIDRRKENACGKEEKKGAKDLLGIMIGASNTTSNVSVTVDDIVEECKTFFFAGKHTTSNLLTWTTILLAMHPEWQVRAREELLSVCGARDVPTKDDLAKLKTLTMVVNESLRLYPPTIATIRRAKADVELGEYKIPCGTELLIPIVAVHHDQATWGSDASEFNPGRFSNGVSRAAQHPFAFIPFGLGVRTCIGQNLAILQTKLALAIMLRGFSFRLAPSYRHAPTVLMLLYPQYGAPILFQRVSTTATTLGST 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00747 521 PANTHER CYTOCHROMEA2 6 506 - -
Cca03g00747 521 Pfam Cytochrome P450 79 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 Gene3D Cytochrome P450 25 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cca03g00747 521 SUPERFAMILY Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 506 - -
Cca03g00747 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00747 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00747 Cca-Chr3 15513018 15517294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00747 5 513 Cytochrome P450 AT2G26710 72.957 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00747 K15639 - gmx:100786200 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00747 03 15513018 15517294 Cca03g00747 03 15513018 15517294 ECH
Cca03g00747 03 15513018 15517294 Cca11g02132 11 47134541 47137686 PCT