Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00738 ATGGCATTGCTCACCGTCCTGCGCGCGACGCATGTCGTCCTCATCATCTTCGCCGCTCTCCTCCTGCACCCGAGTGAGCGAGTCAACGCGGAGCCCACTCAGGACAGGCAAGCCCTCCTCGCGTTCCTCTCCCTCACGCCGCACGCGAACCGGGTTCAGTGGAACACCTCCGGTTCGGCCTGCGACTGGTTCGGCGTCCAATGCGACCCCTCTCGCTCCTTCGTCCGCTCCCTCCACCTCCCCGCGGTGGGCCTCGTGGGCCCAATCCAGCCCAACACGCTCGGTCGGCTCACGCAGCTTCGAGTCCTCAGCCTCCGCCACAACGCCCTCAGCGGCCAGATCCCCGCCGATTTCTCCAACCTGGCCTTCCTCCGCAACCTCTACCTCCAAAACAACAACCTCTCCGGCGAGTTCCCCGCCGTGTTAACTCGCCTCACTCGCTTGACTCGCCTCGAACTCTCCAACAACAACTTCACGGGCCAAATCCCGTTCTCGCTCAACAATCTCACTCACTTAACCGGCCTCTTCTTAGAAAACAACTCTTTCTCAGGTAACCTTCCAAGCATTACAACAAAATTAGTCAACTTCGATGTTTCCAATAACCGCCTCAACGGCTCCATCCCCAATGCCCTCTCCCGTTTCCCAGCGACGTCGTTTTCGGGAAACAACGACCTCTGCGGGAAACCGTTACCGCCTTGCACCCCTTTCTTCCCGGGACCGACTCCTTCGCCTTTTGTTCCACCGGCTGCGCCGGTCGCCAAGAACTCCAAAAAGCTCTCCACTGCCGCCATTGTGGGAATCGCGGTCGGGGGGTCTCTCCTCGTACTTCTCTTACTGCTGCTTGTTCTGTTTGTGTGCTGCcggcggaggcggcggacgaagccgccgcagggcgtggtgtcggcgcggcgcggcggcggcggcgaaggcggAACGTCGTCTTCGAAGGATGATATGACGGGGTCGGTGGAGGCGGCGGAGAGGAACAAGCTGGTGTTTTTGGAGGGTGGGGTGTATGGGTTTGGGTTGGAGGATTTGTTGAGGGCTTCTGCGGAGGTTTTGGGGAAGGGGAGTATGGGGACTTCTTACAAGGCGATTTTGGAGGATGGGACGACGGTGGTGGTGAAGAGGTTGAAGGATGTGGCGGTTACGAAGAGGGAATTCGAGACGCAAATGGAGGTTGTTGGGAAGGTTAAGCACGAGAATGTGATTCCTCTAAGAGCGTTTTACTTCTCCAAGGATGAGAAATTGCTTGTTCACGATTACATGACCGCCGGTAGCTTGTCTGCACTGCTTCACGGGAGCAGAGGGTCAGGGCGAACGCCGCTAGATTGGGACACGCGAATGAGAATAGCATTGGGAGCCGCACGAGGCCTGGCGTTCCTCCACGTGTCAGCCAAACTGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTCCACCCGAACCACGAACCCTGCGTTTCGGACTTCGGACTGAACCCGATATTCGCGAACCCGGTTCCCTCGAACCGGGTGGCGGGTTACCGGGCCCCGGAGGTTCTGGAAACCCGAAAGGTGACATTGAAATCCGACGTGTACAGCTTCGGCGTGCTGGTGCTGGAGCTCCTAACGGGCAAGGCGCCGAACCAAGCCTCGCTGAGCGAGAAAGGGATCGACCTTCCACGTTGGGTGCAGTCAGTGGTGCGCGAAGAGTGGACCGCGGAAGTGTTCGACGCGGAACTCATGAGGTACCAGAACATCGAAGAGGAGATGGTTCAGTTGTTGCAGATTGCCATGTCCTGCGTTGCGCTTGTGCCCGACCAGAGGCCCAACATGGATGAGGTGGTTCGCATGATTGGGGATATTGTTAGCCGCGGCGAGACCACCGACGAAGGGCTTCGCCAGTCGTCTGATGATCCTTCCAAAGGATCGGACGGTCAGACGCCGCCTCAGGACTCCCGGACTACCCCTAGGTCGGACACATCGTAG 1971 0.5606 MALLTVLRATHVVLIIFAALLLHPSERVNAEPTQDRQALLAFLSLTPHANRVQWNTSGSACDWFGVQCDPSRSFVRSLHLPAVGLVGPIQPNTLGRLTQLRVLSLRHNALSGQIPADFSNLAFLRNLYLQNNNLSGEFPAVLTRLTRLTRLELSNNNFTGQIPFSLNNLTHLTGLFLENNSFSGNLPSITTKLVNFDVSNNRLNGSIPNALSRFPATSFSGNNDLCGKPLPPCTPFFPGPTPSPFVPPAAPVAKNSKKLSTAAIVGIAVGGSLLVLLLLLLVLFVCCRRRRRTKPPQGVVSARRGGGGEGGTSSSKDDMTGSVEAAERNKLVFLEGGVYGFGLEDLLRASAEVLGKGSMGTSYKAILEDGTTVVVKRLKDVAVTKREFETQMEVVGKVKHENVIPLRAFYFSKDEKLLVHDYMTAGSLSALLHGSRGSGRTPLDWDTRMRIALGAARGLAFLHVSAKLVHGNIKSSNILLHPNHEPCVSDFGLNPIFANPVPSNRVAGYRAPEVLETRKVTLKSDVYSFGVLVLELLTGKAPNQASLSEKGIDLPRWVQSVVREEWTAEVFDAELMRYQNIEEEMVQLLQIAMSCVALVPDQRPNMDEVVRMIGDIVSRGETTDEGLRQSSDDPSKGSDGQTPPQDSRTTPRSDTS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00738 656 Gene3D Transferase(Phosphotransferase) domain 1 423 634 - -
Cca03g00738 656 Gene3D Ribonuclease Inhibitor 32 190 IPR032675 -
Cca03g00738 656 Pfam Leucine rich repeat 87 134 IPR001611 GO:0005515
Cca03g00738 656 MobiDBLite consensus disorder prediction 617 656 - -
Cca03g00738 656 Gene3D Ribonuclease Inhibitor 191 236 IPR032675 -
Cca03g00738 656 CDD STKc_IRAK 354 616 - -
Cca03g00738 656 MobiDBLite consensus disorder prediction 295 321 - -
Cca03g00738 656 MobiDBLite consensus disorder prediction 633 656 - -
Cca03g00738 656 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00738 656 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Cca03g00738 656 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Cca03g00738 656 Pfam Protein kinase domain 351 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g00738 656 PANTHER OS05G0480400 PROTEIN 15 635 - -
Cca03g00738 656 SUPERFAMILY Protein kinase-like (PK-like) 352 612 IPR011009 -
Cca03g00738 656 PANTHER OS05G0588300 PROTEIN 15 635 - -
Cca03g00738 656 SUPERFAMILY L domain-like 33 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00738 Cca-Chr3 15057226 15061401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00738 30 639 Receptor kinase-like Gene Family AT5G58300 54.589 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca03g00738 Pkinase 6.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00738 - - gmx:100784259 996.882