Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00719 ATGTCAAACATGGATGATGGCCCATGCAGTGAGACGCCCACGTTGAAGTCAAGCGCGTTTGGTTTGACGAATCGTTCAAACCCTCTTTATCCAGCTCATACATATACACACTCACGCCCATCTCTATCTTCTCTCCATCACCACCAAACTAAACGCACTTATTCACTTCCCCACATGGCCGACGAACAACCTCAACCGAACATGGCCGCAACAAAGGAGCGACTCCGCACAAGATGCTGCTACTGTCTCTGCCACACCTTCTGGGTCCTCGTAGTCCTCATAATCATCCTGGCCATGCTCGTGATATTGGTGTTGTACATCATCATCACGCCTCGCTCCTTCAGGTTCCACGTCACCGAAGCCAGGCTCACGCAATTCGACTACAACGccaacaacaccaccctccgctacgacctcctcctcaacatcaccgccaccaaccccaacaAGAAGCTAAAGATCTACTACGACGTCGTTCAGGCCACCGCGCTCTACCGCGCCGTTAACCTCTCCACAACGGACGTTAACATGCCATGGAACTCCTACCTCCAGTACAAGAAGACCACTAACCGCTTCAGCGCCGTTTTCTCCGGTCAACGTTTGGTGCTGCTCAATCCGAACCAGGTTCCGGAGTTTCGTGAAGATAACGAAGATGGGGTTTTCCCTATTCGTGTTAAGATTCGGTTCAATATTAGGTTCAGGCTTGGGAATCTTCAGTCTGGGCACTTCAATGCGAGAGGCACGTGTAAGCTCAAAGTTCCGTTGGCTGCTTCTAATGGAAAACCTGTCGCTGTGTTTGATCCCACCAAGTGCCGAGTCGATTTCTGA 828 0.4698 MSNMDDGPCSETPTLKSSAFGLTNRSNPLYPAHTYTHSRPSLSSLHHHQTKRTYSLPHMADEQPQPNMAATKERLRTRCCYCLCHTFWVLVVLIIILAMLVILVLYIIITPRSFRFHVTEARLTQFDYNANNTTLRYDLLLNITATNPNKKLKIYYDVVQATALYRAVNLSTTDVNMPWNSYLQYKKTTNRFSAVFSGQRLVLLNPNQVPEFREDNEDGVFPIRVKIRFNIRFRLGNLQSGHFNARGTCKLKVPLAASNGKPVAVFDPTKCRVDF 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00719 275 PANTHER OS05G0367900 PROTEIN 70 274 IPR044839 GO:0098542
Cca03g00719 275 PANTHER PROTEIN, PUTATIVE-RELATED 70 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00719 Cca-Chr3 14099444 14100409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00719 108 256 SNARE and Associated Proteins AT1G32270 34.899 2.40e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00719 - - ccaj:109813660 542.347