Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00718 ATGGACGACAAGCAAGCGCCGCCAGATCAACCCCGCCGCCGCGGCCGAAGGTGGTGCTACTGGTTCCTCCGAATCTTGTGGAtcctcttcgtctgcatcatcgtcttcgtggtcctcgtgatcctcgtgttGTACAGCGTAATCCAACCCCGCCCCTTCAAGTTCCAAGTCAGCGAAGCCAGACTCACCGAGTTCAACTACAGCGACGACGGCAGCAACACCCTCCGTTACAACCTCGTCCTCAACTTCACCGCCATAAACCCCAACAAGATGCTCAGCATCTACTACGACAAAGTGGAGGGTCACGTGCTCTACGGCGGCGTCTGGGTCGATTCAACGCACGTGGTCACGTGGAACACCTCGTTCCGCCAGTACACGAAGAGCACGGACCCCATGAACGGGCGTTTCTGGGGGCGACACGTGGTGGTGCTTGACGCCTCTGATTTCGAGCGAGATAAGAGAAACGGGGTTTTTAACATCGATTTGAGGCTCAACTTTGGGATTAGGTTGAGGCTCGGGGACTTCATAGCCGGGGACATGAAGCCCAGGGCCCAATGCGGGCTTAAGGTTCCTTTCGTTTCTAATGAGACTGCGGTTACTGGGTTTCGCCTCACTCAGTGCGATATTGATTTCTGA 636 0.5157 MDDKQAPPDQPRRRGRRWCYWFLRILWILFVCIIVFVVLVILVLYSVIQPRPFKFQVSEARLTEFNYSDDGSNTLRYNLVLNFTAINPNKMLSIYYDKVEGHVLYGGVWVDSTHVVTWNTSFRQYTKSTDPMNGRFWGRHVVVLDASDFERDKRNGVFNIDLRLNFGIRLRLGDFIAGDMKPRAQCGLKVPFVSNETAVTGFRLTQCDIDF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00718 211 PANTHER OS05G0367900 PROTEIN 11 208 IPR044839 GO:0098542
Cca03g00718 211 PANTHER PROTEIN, PUTATIVE-RELATED 11 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00718 Cca-Chr3 14093272 14093907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00718 47 201 SNARE and Associated Proteins AT1G32270 29.114 2.96e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00718 - - ccaj:109813647 408.683