Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00705 ATGGGTGATGGTTTGATGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCCTGGCTAAACCCATTGACGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGCTTAATCGAATCTCCCGCTCCCGGTATTATTTCCAGACGTTCCGTATATGAGCCTCTCCAAACAGGACTTATTGCTATTGATTCGATGATCCCCATAGGACGTGGCCAGCGAGAATTAATTATTGGAGACAGACAAACGGGTAAAACAGCAGTAGCCACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGCGTTTATGTAGCTGTTGGTCAAAAAGCATCTTCTGTGGCTCAAGTGGTGACTACCTTACAAGAAAGAGGAGCAATGGACTACACTATTGTAGTAGCTGAAACAGCGGATTCTCCAGCTACATTACAATACCTTGCCCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATTATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACTGCCTGGTCGCGAAGCTTATCCAAGGGATGTTTTTTATTTGCATTCGGaagataagaaataa 675 0.4237 MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAVGQKASSVAQVVTTLQERGAMDYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRLPGREAYPRDVFYLHSEDKK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00705 224 Gene3D - 1 221 - -
Cca03g00705 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 221 IPR027417 -
Cca03g00705 224 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 220 - -
Cca03g00705 224 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 74 220 IPR000194 GO:0005524
Cca03g00705 224 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00705 Cca-Chr3 13310816 13311490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00705 11 212 Primary Pumps ATPases(2) AT4G38510 28.767 1.79e-18 81.6