LGRPv2

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca03g00684	ATGGGGAGAGGAAGGGTGCAGTTGAAGAGGATCGAGAACAAGATCAATAGGCAAGTTACGTTCTCAAAGAGAAGGTCTGGTTTGCTCAAGAAAGCACACGAGATCTCTGTGCTTTGTGATGCTGAAGTGGCTCTCATAGTCTTCTCCACCAAAGGAAAACTCTTTGAGTACTCTAGTGATCCCTGTATGGAACGAATTCTTGAACGGTATGAGAGGTATTCATATGCGGAGAGGCAACTTGTTGCAAGTGAACCACAAACTGAAAATTGGACTCTAGAACATGCAAAGCTCAAAGCAAGGTTGGAAGTCCTACAGAAAAATCAAAGAAATTTTATGGGACAAGATTTGGATGGCCTAAGCATCAAAGAGCTTCAGAATTTGGAGCATCAGCTTGATAGTGCTCTCAAACACATTAGATCACGGAAGAACCAACTCATGTATGAATCTATTTCAGAGCTTCATAAAAAGGATAAGGCCCTACAGGAACAAAACAACACTCTCTCTAAGAAGATAAAGGAGAAAGAGAAGGCACTAGCCCAACGGGCACAACTGGAACGACATGGTGATGAAATGGATCTAACTTCTTCTGTTCTTGTACCTCAACCAGTGGAAACCTCAAATATTAGAGGCTCCTCACAAGTCAGAGGTGATGGAGATAATGAAGGAACCCCAACTCCAACTCGAGCCAATGCCATTCTTCCACCTTGGATGCTTCGTCCTACAAATGAATAG	732	0.429	MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSSDPCMERILERYERYSYAERQLVASEPQTENWTLEHAKLKARLEVLQKNQRNFMGQDLDGLSIKELQNLEHQLDSALKHIRSRKNQLMYESISELHKKDKALQEQNNTLSKKIKEKEKALAQRAQLERHGDEMDLTSSVLVPQPVETSNIRGSSQVRGDGDNEGTPTPTRANAILPPWMLRPTNE	243

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cca03g00684	243	SUPERFAMILY	SRF-like	2	90	IPR036879	GO:0003677\|GO:0046983
Cca03g00684	243	MobiDBLite	consensus disorder prediction	198	227	-	-
Cca03g00684	243	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
Cca03g00684	243	PANTHER	AGAMOUS-LIKE MADS-BOX PROTEIN AGL8 HOMOLOG	1	216	-	-
Cca03g00684	243	CDD	MADS_MEF2_like	2	79	IPR033896	GO:0000977\|GO:0045944
Cca03g00684	243	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
Cca03g00684	243	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
Cca03g00684	243	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983
Cca03g00684	243	Coils	Coil	150	187	-	-
Cca03g00684	243	Pfam	K-box region	84	171	IPR002487	GO:0003700\|GO:0005634\|GO:0006355

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca03g00684	Cca-Chr3	12518303	12530873	Dispersed/Wgd

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca03g00684	1	202	MADS-box Gene Family	AT1G26310	62.679	7.73e-89	261

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-MIKC	Cca03g00684		K-box	4.6e-29	No_clan

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca03g00684	K09264		-	gmx:100816836	446.432

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Cca03g00684	03	12518303	12530873	Cca11g02043	11	45993038	45999716	ECH
Cca07g02282	07	51330477	51337703	Cca03g00684	03	12518303	12530873	ECH
Cca09g00339	09	7947251	7954547	Cca03g00684	03	12518303	12530873	ECH
Cca03g00684	03	12518303	12530873	Cca03g00684	03	12518303	12530873	ECH
Cca11g02044	11	46007708	46015437	Cca03g00684	03	12518303	12530873	PCT

Showing 1 to 5 of 5 entries