Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00683 ATGAAACAGCGGATTACATTTGCTGAGGTCATTGAGAATGATTGGTTCAAGAAAGGATATAAGCCACCCGTATTTGAACAGGCTAATGTTAGTCTTGATGATGTAAATTCTATTTTCGGTGAATCTACGGATTCAAAAAATCTTGTTGTAGAGAAGCGTGAAGTGGGGCCTGTGGCACCTGCAGCACCTGTGACTCTGAATGCCTTTGAGCTCATCTCCAAATCTCAGGGCCTCAATCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTAGTTAAAAGGGAAACACGGTTCACATCCAAATATCCAGCAGATGAAATAATTTCAAAAATTGAACAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGAGAAAAGACTGGACGGAAAGGTCATCTGTCTGTGGCTACTGAGATCTTAGAGGTGGCCCCTTCACTATACATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAAAACCTTTCTACTGGGCTAAAAGACATTGTTTGGAAATCCGAGCCTATCGACGAAGAAAAACAAGGTGCCAATACATCAAAATAA 606 0.4092 MKQRITFAEVIENDWFKKGYKPPVFEQANVSLDDVNSIFGESTDSKNLVVEKREVGPVAPAAPVTLNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKYPADEIISKIEQAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLSTGLKDIVWKSEPIDEEKQGANTSK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00683 201 Pfam NAF domain 63 123 IPR004041 GO:0007165
Cca03g00683 201 Gene3D Kinase associated domain 1, KA1 61 186 - -
Cca03g00683 201 ProSiteProfiles NAF domain profile. 61 85 IPR018451 GO:0007165
Cca03g00683 201 CDD CIPK_C 67 182 - -
Cca03g00683 201 PANTHER - 3 188 - -
Cca03g00683 201 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 3 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00683 Cca-Chr3 12475108 12477548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00683 4 195 CBL-interacting serine-threonine protein kinases AT1G30270 74.479 2.71e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00683 - - gmx:100788746 363.614