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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g00681
ATGGAGTCTTGGAGCTTTGTTGGTGAGGAGAAAGGGTATGTCTCCAATGGAGCACTCTCATCTCCCAACACACTTGGGAGAAGCAAAGGTTCCTTTTTGGGTTGGGAGCTGAAGACCCCATGTAGTTTTTCCAATGACATGTTGGCTTTGGGTCAGCAAAATGTTCAGGATCAAGGTTTTGAGGAGTTGGGTTTTCCAGGAATGTTGGGTAATAAGCAATTGTTTGGTGATCCTATTAGAAAGGTGGATGATGTTGTTGTTGACTGCAGAGTCACTAGTCCTAGTCCCGTTGTGGCTGCCCCAAATGCATTTTCTGCAAGGGGGGACTTCAATTCCAAGCTTTCAAACTCTCTTGGGGACTCTAATGGTGCCAATTCACTCATTGATTTGAAGCTGGGTAGGTTTGGTGACCATGGAGATGCCATGGTTCCAACATTTTCCAAGGGAGCCCCCACTTTGTCTTCATCTGAGTCCTCTACACCACAGAAAAGGGTGAGAGCTTCTGGGGTCCATTCTCAGACTGCTTATTGTCAAGTCTATGGCTGTAACAAGGATCTGAGTGGTTGCAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAAACTTCCAAAGTTATAGTCAACGGCATTGAACAAAGGTTTTGTCAGCAATGTAGTAGGTTTCATTTGCTGGTTGAATTTGATGATGGTAAGCGTAGCTGTCGTAAGCGCCTTGCAGGCCATAATGAGCGTCGAAGAAAGCCTCAAGTTGGTATTCACTCTGGAAAAGCTGGGAGATTGCTTCAGCCTTATAGTGATAGCAGATTCCAGGAAACAATGCTAACATCATCCTTTATCTGCCAAGAAATACTCCCCAGTGGGGTCTTGTCTTCTGAGAAATATGGAGCAAGTAACTGGTGGAGACCTATAGAAGCTGAAGACACCAATGGTTTTACTTTTAAGCCACTTTCTTCCATTCCTATTACCAATGGACATCCTCAATCAAGATCTCTATTCCCTTCATACACCGAAAAACAAGTGCAATTTCTTAACAAAAACAACAACCAATATCATCATCCACCTTCCCTTGGTGGCCAAAATTCCGGGTCACAATTAGTATTCCATGACACTTGCTTAGGAAGTGAGGACTTGAATGTTTTTGATACAGAATTATCAGGAATTTCTGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCATAGGCACTACAGCATGAGTGAGGTTTCTGAAAAGATGATGGGAATAAGTTCACAGGATTCAAGTGGGGTGTCAGATAAGTTTCCATCTGCGGATGGAACTCCTCTTGATCTCAGTCATCCCATACTCATATCAGATAGTAATGAAATTGTCAATTTTGAAATGGCAGAAGGGATCTTCCAAGGTTGCACTGAAGATGGCCTCACCATTGACTTGCTTCAACTATCATCAAGAAATGTCACAATGCAACTGCATGGTGGCACCACTCCACCACTATCATCAAGAGATGATTATGATTAG
1527
0.4348
MESWSFVGEEKGYVSNGALSSPNTLGRSKGSFLGWELKTPCSFSNDMLALGQQNVQDQGFEELGFPGMLGNKQLFGDPIRKVDDVVVDCRVTSPSPVVAAPNAFSARGDFNSKLSNSLGDSNGANSLIDLKLGRFGDHGDAMVPTFSKGAPTLSSSESSTPQKRVRASGVHSQTAYCQVYGCNKDLSGCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLQPYSDSRFQETMLTSSFICQEILPSGVLSSEKYGASNWWRPIEAEDTNGFTFKPLSSIPITNGHPQSRSLFPSYTEKQVQFLNKNNNQYHHPPSLGGQNSGSQLVFHDTCLGSEDLNVFDTELSGISDSGCALSLLSSQSQNSSSHRHYSMSEVSEKMMGISSQDSSGVSDKFPSADGTPLDLSHPILISDSNEIVNFEMAEGIFQGCTEDGLTIDLLQLSSRNVTMQLHGGTTPPLSSRDDYD
508
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g00681
508
ProSiteProfiles
Zinc finger SBP-type profile.
174
251
IPR004333
GO:0003677
Cca03g00681
508
MobiDBLite
consensus disorder prediction
146
167
-
-
Cca03g00681
508
SUPERFAMILY
SBT domain
175
255
IPR036893
GO:0003677|GO:0005634
Cca03g00681
508
PANTHER
SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4
44
487
IPR044817
GO:0003677
Cca03g00681
508
Pfam
SBP domain
177
250
IPR004333
GO:0003677
Cca03g00681
508
Gene3D
-
167
238
IPR036893
GO:0003677|GO:0005634
Cca03g00681
508
MobiDBLite
consensus disorder prediction
148
167
-
-
Cca03g00681
508
PANTHER
1 PROTEIN, PUTATIVE-RELATED
44
487
-
-
Cca03g00681
508
MobiDBLite
consensus disorder prediction
241
260
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g00681
Cca-Chr3
12391052
12395236
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g00681
128
405
SBP-box Gene Family
AT1G69170
41.367
1.06e-52
182
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
SBP
Cca03g00681
SBP
1.4e-30
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g00681
-
-
gmx:100777766
752.666
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g00681
03
12391052
12395236
Cca11g02042
11
45927585
45932438
ECH
Cca03g00681
03
12391052
12395236
Cca03g00681
03
12391052
12395236
ECH
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