Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00675 ATGGCTGGACAACTTGGAGTGCTGAATGCACTTGATGTGGCCAAGACACAATGGTACCACTTCACTGCAATTGTTATAGCTGGAATGGGTTTCTTCACTGATGCCTATGATCTTTTCTGCATTTCCCTTGTCACCAAGCTTTTGGGGAGGATATATTACACACAGCCAGGTGCAGCAAAGCCAGGAACTCTTCCTCCAAGAGTTCAATCTTCTGTGACAGGTGTGGCACTATGTGGCACATTAGCTGGCCAACTATTCTTTGGTTGGCTTGGTGACAAAATGGGAAGGAAAAAGGTCTATGGCTTAACTCTTGTCCTCATGGTAGTGTGCTCCATTGCCTCAGGGCTCTCCTTTGGATCAACTCCAAAGGGTGTCATGGCAACACTTTGTTTCTTCAGGTTCTGGCTAGGGTTTGGGATCGGTGGTGACTACCCTCTTTCTGCCACAATCATGTCTGAATACGCCAACAAGAAGACTCGTGGGGCGTTCATAGCAGCAGTGTTTGCCATGCAAGGATTTGGAATCTTGGCTGGTGGAGTAGTTGCCTTGGTTGTTTCATATGCATATGACCAAAAGTACAAGGTTCCTACTTATGAACAAGATCCAGAAGCATCCTTGGTGCCTGCATTTGACTATGTTTGGAGAATAGTTTTGATGTGTGGTGCAGTACCAGCAGCACTCACCTACTACTGGCGCATGAAAATGCCAGAGACTGCACGTTACACAGCCCTTGTGGCCAAGAATGCAAAACAAGCTGCTGCAGACATGTCCAAGGTGTTACAAGTGGAACTTGAAGCTGAAGAGGAAAAGGTGAAGGAATTAACAGAGAATGAGGGCAACAAGTATGGTTTGTTCAGCAAGGAGTTTGTGAAACGCCATGGTTTGCATTTGGTTGGAACCACCACCACTTGGTTCCTTTTGGTTTTATTTTGTCCATCTAATATGCTATCAAACTAA 957 0.4566 MAGQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTQPGAAKPGTLPPRVQSSVTGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLVLMVVCSIASGLSFGSTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALVVSYAYDQKYKVPTYEQDPEASLVPAFDYVWRIVLMCGAVPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEEEKVKELTENEGNKYGLFSKEFVKRHGLHLVGTTTTWFLLVLFCPSNMLSN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00675 318 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 309 - -
Cca03g00675 318 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Cca03g00675 318 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 309 - -
Cca03g00675 318 Coils Coil 257 277 - -
Cca03g00675 318 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 318 IPR020846 GO:0022857
Cca03g00675 318 SUPERFAMILY MFS general substrate transporter 11 260 IPR036259 -
Cca03g00675 318 Pfam Sugar (and other) transporter 24 297 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00675 Cca-Chr3 12299651 12302522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00675 1 316 Inorganic Solute Cotransporters AT3G54700 76.415 3.07e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00675 K08176 - gmx:100780201 553.903