Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00666 ATGAATTGTTGTAACTTGAAGGATTTGATGGTGCCTGAAGCCTACATCATCCATGTGAGGAAGTTTTCATCATCAAGTTTGACTGAGACAGGTACGATTGTTTGGATTGTGGAAGCTGTTGAAGAGTTCATTGTTTGCCCCAAGATCTTATTGCTCTTGATACCATCTGAGGCTGCTTTAGGACTTTTTGGTATAGAGAATAATGGCCTCCATTTTTCCTTGGCTTTTGCAAGTGCTGAGGAGGTTGGGGGAAATGCTTTGACAACCCAGAATTGGACTATGAGTTTCAATGAGATAAAGTTGTTAACTTTATGTTTATTTAAGAGTATTAAAGCAAACAACTTTTATGAAGAGGGTGTAAAATTGATTGTGGTGGTTGAGGGTGAAGGGTCTAGTTCAATTGAAGAAGAAAAGGTTGATATGGCAGCAAAGCTCCTGCATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGAAACCATATTATCACGGCTCGCCGCATTAGCCAGAAGAGGCTTCCTTCTGGTAATTCGCATTTCAGTGATGGCAGCTTGGAAAGAGATTCTGATAACATACACCATCGACAAACATCAACTGATACCAACTTAAACAAGGGTGTGAATGAAAGGCAAAGAATTTCAACTGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCAGTGTCGTCTCTGGACTGCAAGGCTGAAGCAGATGCCCCATTTGATCGGATTCTTTTTCCTGAAACTCCTTCAAGAGATGTAGTTATGAACCAACCAACCATCTCTCCCCATTTTGGATGTCAGTCCCTTGACCTGAGGGATGTGGTGAAGGATTCTATGTACAGGGAAGCGCGAGGTTTTTCAGTCAAGACTACAGCCAAAGAGGAATCTGCCATTAATGCCGCAAAGCACAGGGATTCACCGCGACCTATTCAGATGTCTAAATCTGTTGATGGATCTTACAGAGTTGGAATAGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCGATCCGAGTCCTTGCTAAGCTTAGAGAAGCACCTTGGTATCATGCAGAAACCAAAGAACCTCCAAGATCATCACATGAAGTAAAAGATGGACACTGGCATTCCATTTCAAAGGATGCTCCTTGGTTTGCTTATGAAGGAAAAGAAATAAGCCGTTTATCTTTTGAATCACGAGATACCATTAAATCCACACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAGGAAGGCTCGTTGCGCACTTACAGTTCTGACTCAAAACCCAGTCACCTCTCAAGGAACATTTACAGTGGCACATCCACCTCAAATGACAAATTCTCAATCCCACAACAATCTTCAGCGACCCCGAGTCGTCCACCTAGTGTTGTGGCTAAATTAATGGGCTTGGAAGCGTTACCAGATTCCTCTTTGGCTGTTGACACTCAATCAAGTTCAACTGAAGCTTACTCAGCACAAGATAATGGCCAGTTTCCTAGATCATCAAAAAATGGACTCACCAGGCCACTCCGAATTTCTAATTCTCCGAAAATCTCATTGAAAGACCCAACTTCCCCACGGCGAAAGAATCCTGATCTGGTTATGAAACCCATCTCAAGTTCAAGAGTTCCCATTGAACCAGCACCATGGAAGCAGCAGGAAGGAAATCGAAGCTCCCAGAAACCGAGTTTAAGGACCTCAAAGGCTTCAGCAAGAGCACCAGAATCCTTTCCTTCAGTTTATAGCGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAAAGATCTCAGAGCACTAAAACAAATACTTGAAGCAATGCAAGAAAAGGGGCTATTAGAGAGCAGAAAAGAAGAAGAGGCTCCAAATGTTGTTGGAAGTCAAAGTGTCTATGAACCAAAAACTACCAACCAAATTCAGAATACCAGGTCAGTAAGGCAACCAAACACTCAGAGAAACAATTTTCTATCTTCCACACTCAAGGGGTCTGACACAGTAAGGGGTTTTGAATCCCCAATAGTGATAATGAAACCAGCAAAACTTGTTGAGAAAACTAAACACCAGAATGGTGGTGTATGTTTAGATAATAAAACTGGTACATCTGCTACTCGAGTAGCTAAAGATCAGTCTCCCAGAAACAATCACCGGGATGTGTCTGCCAGTTCCACTGATAAGAAAGCAGGTAGTAGTAAGAGTACAAGATCAGTACAATCTCAAGCTAGGTCTCAACAACTTCCCAAAGAAAATAACCAAAATTCAGTGAAGCACTCAGGATCAGTGAGCCCGAGATTGCAACAGAAGAAGTTGGATTTAGAGAAGCGGTCTCGTCCACCTGCTCCACCATCAGATTCAAGCAAACCAAGAAGACAATCTGGTAAGAAGGCCCCAGAATTGGGTTCCCCAGGTGGAAAACTGAGACCCAAAACCCTCAACTTGCAGCATAGTGACGAGCAACTGAGTGAGATAAGCAATGAATCATATTCAAGAAGTTTAAGTTGCCAAGGGGATGAAATTTCTCTGCAATCAGACAGTTTAACTGTCTACTCAAAGATGGATATGGAAGTTACAAGTAGTTTACAATCTGTTGAAATTGATGACAGCCAAAGCCCATCTTTGAAGGCTGTGAAGCAACTGATTTCAGAGACAGTGCAGAAAAAATCAACTACAAGGTTGGATGAGGATGAGACAGTTGCAGAACTTGCCACAGATGCCCCAGAACATCCAAGTCCTATCTCAGTTCTTGATGGTTCTGTGTACAGAGATGATGTGCCATCCCCAGTAAAGCAGATATCTGAAGATTCAAAAGCTGATGATGCTCAAGAATCTAAAGAAGATGAGACTAAAGATCAGTGGGACTCTGTAGATAGCCTTTCATTTAACAGCGCAGGATCCGGCGAGATCAATCGCAAGAAATTACAGAACATAGACCACCTTGTTCAGAAGCTTCGACGGCTGAACTCCAGTCATGACGAAGCCAGAATCGATTACATTGCTTCCCTATGTGAAAACACAAATCCAGACCACAGATACATCTCTGAAATATTATTAGCTTCAGGCCTCTTACTGAGAGATCTGAGTTCTGAGTTGATGACATTTCAACTTCACTCATCGGGTCACCCCATTAACCCTGAGCTGTTCCTTGTCTTGGAACAAACCAAGGCAAGTAGCTTGCTTCCAAAAGAAGAAACCGGGCCCGGAAAAGATGCTTGTATGAAGCTGAACAAAGAGAAATTTCACAGGAAACTAATCTTTGATTCTGTGAATGAGATTCTTGGTGCAAAATTTGGCTCCTCCCCAGAGCCATGGTTTCAGCCGAACAGCAACAAACTGACAAAGAAAACCTTGAGTGCTCAAAAGCTGCTTAAAGAACTATGCTTTGAGATTGAAAAGATTCAAGCCAAGAAGCCAGAATGCTGCTTTGAGGATGAAGATGATGGCCTGAAAAGCATTCTGTGTGAAGATGTTATGCATGGCTTAGAAAGTTGGACAGATTTTCATGGTTATTTACCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTAGTAGATGAGGTTGTGATTGGTGAGTCAGCTGGTTTGAGACTCAAGCCATCAGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3681 0.4224 MNCCNLKDLMVPEAYIIHVRKFSSSSLTETGTIVWIVEAVEEFIVCPKILLLLIPSEAALGLFGIENNGLHFSLAFASAEEVGGNALTTQNWTMSFNEIKLLTLCLFKSIKANNFYEEGVKLIVVVEGEGSSSIEEEKVDMAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRNHIITARRISQKRLPSGNSHFSDGSLERDSDNIHHRQTSTDTNLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEADAPFDRILFPETPSRDVVMNQPTISPHFGCQSLDLRDVVKDSMYREARGFSVKTTAKEESAINAAKHRDSPRPIQMSKSVDGSYRVGIDGKQSVPIDLKESIRVLAKLREAPWYHAETKEPPRSSHEVKDGHWHSISKDAPWFAYEGKEISRLSFESRDTIKSTPKLKELPRLSLDSKEGSLRTYSSDSKPSHLSRNIYSGTSTSNDKFSIPQQSSATPSRPPSVVAKLMGLEALPDSSLAVDTQSSSTEAYSAQDNGQFPRSSKNGLTRPLRISNSPKISLKDPTSPRRKNPDLVMKPISSSRVPIEPAPWKQQEGNRSSQKPSLRTSKASARAPESFPSVYSEIEKRLKDLEFKQSGKDLRALKQILEAMQEKGLLESRKEEEAPNVVGSQSVYEPKTTNQIQNTRSVRQPNTQRNNFLSSTLKGSDTVRGFESPIVIMKPAKLVEKTKHQNGGVCLDNKTGTSATRVAKDQSPRNNHRDVSASSTDKKAGSSKSTRSVQSQARSQQLPKENNQNSVKHSGSVSPRLQQKKLDLEKRSRPPAPPSDSSKPRRQSGKKAPELGSPGGKLRPKTLNLQHSDEQLSEISNESYSRSLSCQGDEISLQSDSLTVYSKMDMEVTSSLQSVEIDDSQSPSLKAVKQLISETVQKKSTTRLDEDETVAELATDAPEHPSPISVLDGSVYRDDVPSPVKQISEDSKADDAQESKEDETKDQWDSVDSLSFNSAGSGEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELMTFQLHSSGHPINPELFLVLEQTKASSLLPKEETGPGKDACMKLNKEKFHRKLIFDSVNEILGAKFGSSPEPWFQPNSNKLTKKTLSAQKLLKELCFEIEKIQAKKPECCFEDEDDGLKSILCEDVMHGLESWTDFHGYLPGVVLDVERLIFKDLVDEVVIGESAGLRLKPSVRRRKLFGK 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00666 1226 Pfam DUF761-associated sequence motif 468 490 IPR032795 -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 651 679 - -
Cca03g00666 1226 PANTHER LONGIFOLIA PROTEIN 141 1224 - -
Cca03g00666 1226 Pfam Domain of unknown function (DUF4378) 1023 1203 IPR025486 -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 430 473 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 423 474 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 902 917 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 828 844 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 942 968 - -
Cca03g00666 1226 PANTHER LONGIFOLIA PROTEIN 141 1224 IPR033334 GO:0051513
Cca03g00666 1226 MobiDBLite consensus disorder prediction 187 233 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 706 844 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 707 724 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 565 586 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 490 534 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 489 589 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 739 780 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 209 233 - -
Cca03g00666 1226 MobiDBLite consensus disorder prediction 897 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00666 Cca-Chr3 12134054 12143089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00666 278 1225 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.465 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00666 - - gmx:100787391 1830.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00666 03 12134054 12143089 Cca03g00666 03 12134054 12143089 ECH
Cca11g02031 11 45764215 45769089 Cca03g00666 03 12134054 12143089 PCT