Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00661 ATGGAGGAACATAAATCTGTTATCTCCACCTGGGAACAAGATCAACATGTGGTTGCTGCTGCTCAGCACATTTTGAAGGCACTAGCAACAAGTAAGAGTGTATCTGATGACTTGAGAAAAACCCTTTTGGATCTTGAGACCCAGTTGTCTGCAATTTCCACAGTCAATGAGGAAACAGGAAGTGGCATCAAGCAATTAGAGAGACAGCTTAAGTGTGCTGAAGACAAGATAATGAGGTTGGAGGCAAACCCTTCTTCCATGACATGGGACTCTAGCCCCAATGAGTCTTCTGAGTGTTTGAAAGTTGTTGGTGAAATCCAAGCACTGACTCAGAGTTTGGAAAGCTTTTCTGTGGATGAAAACTGGAAGCAGAAGGAACTTCTTGAGAGGGCTAATTCAATTCTGCAGGTTGCTATGTCAAGGCTTGAGCAAGAGTTGGTCCACATTCTTGGTCAACATAAGCAATACTTTGAGCCTGAGTACATGTCTTTCCATTCTAATAGAGTGGATATGGTGTATGATGAATTGTTTCAATCAGTTGAGGATGAACCAATCGATGAGACCCCGCAGAGTAGCAGCCAATCCGAGGCCAGCACCATTGATCTGGTGAATCCAGCAGTGATTCAAAATCTCAAGAGCATTGCAAATGCCATGTTTGGCTCAAAATACCATCAGGAATTCTGTCAGGTGTTCGTTACTTCCAGGAGGGATGCTTTGGCTGAGTATTTTGTCATTCTTGAGATGGAAAAATTGTGCATTGAGGATGTGCTGAAATTGGATTGGCATTGCCTGAACCGTGAGATGAAGAAATGGATTCGAGCCATGAAGATCATTGTTCGTGTGTATCTTGTCAGTGAAAAGCGATTATTGGCAATGGGAACACACACACCAGAAAAATTGTTTCGTTTACTTGACATGTATGAGGTTTTGGAGCTTCTTGCCGTGGATGTAGACATTTTGTTCTTTGAAGAAATTGGTTCTTTTGTTAGGGGAGAGTTTCACAAGCTTCTAAGGAGATTGGGTGAAACTGTCAAGTCTACATTTCTGGCATTCAGAAGTGCTGTTGCAACTAACCCTTCAAAGACCCCTTTGCCTCAAGGGGGAGTTCACCATGCTACCAAGTATGTCATGAATTACATCATGACACTAGCTGAATATGGTGACACCCTTAATCTCCTTCTTGTTGATGAAAGTTCAACCGATCCTGCAGGCAACAAACATGACACCCCATCTCTCTCATTGTGTCCAATGGCTTGCCAATTTCGCTCAATCACCACAGCTCTAGAATCCAACTTGGTCAACAAGTCCAAGTTATACAAAGATGTGGCTTTGCAACACTTTTTCATGATGAACAACATTTATTACATGGTGCAAAAGGTCAAGTGCTCTGACCTGAGCCACTTCTTTGGAGACTGCTGGCTCCGCCAGCACACCGCCAAGTATCAGCGCCAGGCAAGGTGCTATGAAGGGGTCACTTGGGGCTCAGTACTTTCCATGCTCATGCATGATGGTGTGTCAAGTTGTGCTTCTCAGAGAACCTTGAAGAAAAGGTGCAAAGGGTTCAACACTGCCTTTGCTGAAGTATACAAGACCCAAACAGGGTGGTGCATAGCAGAACCTCAACTTCGTGAGGATCTACAAATTTCAGTGTCTCAGATGGTGGTTCCTGCATACAGCACATACATTGGGAGAAACTCATCCAACATTGCTGACAAGTATATCAAGTACACTGTTGATGATCTACAAAGTTATATTTTGGACCTCTTCCAAGGGTCACCAAAATCTTTGCACTATTCTCATCACAGAAAGTGA 1812 0.4343 MEEHKSVISTWEQDQHVVAAAQHILKALATSKSVSDDLRKTLLDLETQLSAISTVNEETGSGIKQLERQLKCAEDKIMRLEANPSSMTWDSSPNESSECLKVVGEIQALTQSLESFSVDENWKQKELLERANSILQVAMSRLEQELVHILGQHKQYFEPEYMSFHSNRVDMVYDELFQSVEDEPIDETPQSSSQSEASTIDLVNPAVIQNLKSIANAMFGSKYHQEFCQVFVTSRRDALAEYFVILEMEKLCIEDVLKLDWHCLNREMKKWIRAMKIIVRVYLVSEKRLLAMGTHTPEKLFRLLDMYEVLELLAVDVDILFFEEIGSFVRGEFHKLLRRLGETVKSTFLAFRSAVATNPSKTPLPQGGVHHATKYVMNYIMTLAEYGDTLNLLLVDESSTDPAGNKHDTPSLSLCPMACQFRSITTALESNLVNKSKLYKDVALQHFFMMNNIYYMVQKVKCSDLSHFFGDCWLRQHTAKYQRQARCYEGVTWGSVLSMLMHDGVSSCASQRTLKKRCKGFNTAFAEVYKTQTGWCIAEPQLREDLQISVSQMVVPAYSTYIGRNSSNIADKYIKYTVDDLQSYILDLFQGSPKSLHYSHHRK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00661 603 Gene3D Exocyst complex component Exo70 84 598 - -
Cca03g00661 603 Coils Coil 56 83 - -
Cca03g00661 603 SUPERFAMILY Cullin repeat-like 91 589 IPR016159 -
Cca03g00661 603 PANTHER EXOCYST COMPLEX PROTEIN EXO70 290 596 IPR004140 GO:0000145|GO:0006887
Cca03g00661 603 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 290 596 - -
Cca03g00661 603 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 290 IPR004140 GO:0000145|GO:0006887
Cca03g00661 603 Pfam Exo70 exocyst complex subunit 293 586 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca03g00661 603 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 23 290 - -
Cca03g00661 603 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00661 Cca-Chr3 11920849 11922759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00661 1 590 EXO70 exocyst subunit family AT5G61010 38.924 1.16e-149 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00661 K07195 - gmx:100791622 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00661 03 11920849 11922759 Cca03g00661 03 11920849 11922759 ECH