Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g00655 | ATGGCCATGGCTGCTGCTCTGCGACGCGAAGGGAGGCGTTTGGCGCAACCCATCAACGCCCTCCAATCCCATTCCTCTCTCATCTCTCAAGACCAAGCTCCTCATGGGGCTCGCTCCATTTCCACTCAAATTGTGAGGAACCGAATGAAGAGTGTGAAGAATATCCAGAAAATCACCAAGGCCATGAAGATGGTTGCCGCATCCAAGCTGCGTGCTGTTCAAACCAGAGCTGAAAATTCCCGTGGCCTCTGGCAACCCTTCACGGCTCTTCTCGGTGACAATCCCAGTGCTGATGTTAAGAAGAACGTTGTTGTTACCATTTCTTCGGACAAAGGTCTTTGTGGTGGAATCAATTCCACGTCTGTCAAGATAAGCAGGATTCTGCACAAATTGAATTCTGGGCCTGATAAAGAGACAAAGTATGTTCTATTGGGAGAGAAGGCTAAAGTTCAATTGGTACGTGACTCCAAGAAAGACATTGAGCTCACCCTAACTGAATTGCAGAAAAACCCCCTGAATTATACTCAGGTGTCTGTCTTGGCAGATGACATTCTAAAGAATGTGGAGTATGATGCATTGAGGATTGTTTTCAACAAATTTCATTCTGTTGTATCATTTTTGCCAACAGTGTCAACAATACTATCTCCCGAGGTTATTGAGAAAGAGGCTGAAGCCGGAGGAAAGCTTGGGGAACTGGATTCTTATGAGATTGAAGGTGGTGAGACAAAATCAGAAATTCTTCAGAATCTGGCCGATTTTCAGTTTTCTTGTGTCATGTACAATGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCAAGAATGTCTGCCATGGACAGCTCTAGCAGGAACGCTGGGGATATGCTTGATCGTCTCACCCTAACCTATAACAGAACTCGTCAAGCATCAATCACCACTGAATTGATTGAGATTATATCTGGAGCTTCAGCACTGACTGGTTAA | 963 | 0.4548 | MAMAAALRREGRRLAQPINALQSHSSLISQDQAPHGARSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAVQTRAENSRGLWQPFTALLGDNPSADVKKNVVVTISSDKGLCGGINSTSVKISRILHKLNSGPDKETKYVLLGEKAKVQLVRDSKKDIELTLTELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFHSVVSFLPTVSTILSPEVIEKEAEAGGKLGELDSYEIEGGETKSEILQNLADFQFSCVMYNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALTG | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g00655 | 320 | PIRSF | ATP_synthase_gamma | 7 | 318 | - | - | |
Cca03g00655 | 320 | Pfam | ATP synthase | 43 | 318 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 1 | 318 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 43 | 318 | IPR035968 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | Hamap | ATP synthase gamma chain [atpG]. | 39 | 318 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | PANTHER | BNAA05G10580D PROTEIN | 1 | 318 | - | - | |
Cca03g00655 | 320 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 45 | 315 | - | - | |
Cca03g00655 | 320 | PRINTS | ATP synthase gamma subunit signature | 99 | 118 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | PRINTS | ATP synthase gamma subunit signature | 191 | 208 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | PRINTS | ATP synthase gamma subunit signature | 265 | 284 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | PRINTS | ATP synthase gamma subunit signature | 296 | 317 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | CDD | F1-ATPase_gamma | 41 | 315 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | TIGRFAM | ATPsyn_F1gamma: ATP synthase F1, gamma subunit | 41 | 318 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Cca03g00655 | 320 | ProSitePatterns | ATP synthase gamma subunit signature. | 304 | 317 | IPR023632 | - | |
Cca03g00655 | 320 | Gene3D | - | 65 | 277 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g00655 | Cca-Chr3 | 11734739 | 11741195 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g00655 | 45 | 318 | Primary Pumps ATPases | AT1G15700 | 30.462 | 4.05e-28 | 110 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g00655 | K02136 | - | gmx:100813657 | 556.599 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g00655 | 03 | 11734739 | 11741195 | Cca03g00655 | 03 | 11734739 | 11741195 | ECH |