Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00647 ATGTCTCCATGGGTTGTTGCCTTGGCTACAATGGCAGCAGCCACCATAGTATACCGTCTAATAAAGTTCATAACACGTCCTTCGCTGCCACTCCCTCCGGGGCCCAAACCGTGGCCCATACTGGGAAACTTTCCCCACATGGGCCAGGTGCCGCACCAATCTCTTGCGACACTGGCCCGTGTGCATGGGCCACTCATGCATCTCTGCCTCGGATTCGTCGACGTGATTGTAGTCGCGTCGTCGTCCGTGGCAGAACAATTTTTGAAGATTCATGACTCTAACTTCAGTAACCGGCCTCCGAATGCCGGCGCGAAGTACATAGCTTACAACTACCAGGACATGGTGTTCGCGCCGTACGGCCCACGGTGGCGGTTGCTCCGGAAAATCACCTCCGTTCACCTGTTCTCCGGCAGGGCCATGGAAGAGTTTAGACACTTGCGTGAGGAAGAGGTAGGAAGATTGACACGTAACTTGGCGAGTTCGGACTCAAAAGCAGTGAACTTGGGGCAGTTGTTGAACGTGTGCACTACGAATGCATTGGGTAGGGTAGTGATTGGTCGAAGAGTGTTCGATGATGGCAATGGTGGGTGTGATCATAGGGCTGATGAGTTTAAAGCCATGGTGGTGGAGTTGATGGTGCTAGCTGGTGTTTTCAACATTGGTGACTTCATTCCCTCTTTGGAGTGGCTTGACCTTCAAGGGGTGCAAGCCAAGATGAAGAAATTGCACAAAAGGTTTGATGCATTTTTAACTAGCATTGTTGAGGAGCACAAGAGTTCTTCTTCCAAGAGTGAGAAGCATAAGGATTTGTTGAGTACTTTGTTGTCACTTAGGAATGTACCCGATGATGATGGCAACCAACTAACTGATACAGAGATCAAAGCACTACTTCTGAACATGTTTACGGCTGGGACTGACACGTCATCAAGCACCACAGAATGGGCCATCGCGGAACTGATCCGGAACCCGAGAATTCTGGCCCAAGTCCAACAAGAGATGGACAGAGTTGTGGGCCGAGAAAGGAACGTGAAAGAAGAGGACTTGGCCCACCTCCCATACCTACAAGCTGTGATTAAAGAAACCTTCAGGCTCCACCCATCAACCCCTCTTTCTCTGCCACGTGTCGCATCCGAGAGCTGCGAGATTTTCGGGTACCACATTCCCAAGGGCGCCACTGTCTTGGTGAACGTTTGGGCCATAGCGCGCGACCCAAAGGAGTGGGCCGACCCACTTGAGTTCAGGCCCGAAAGGTTCCTACCGGGCGGTGAGAAGCCCGATGTTGATGTTAGAGGCAATGACTTTGAGGTGATACCCTTCGGCGCTGGACGAAGGATTTGTGCTGGATTGAGTCTTGGGCTTCGAATGGTCCAGCTTCTAACCGCAACCTTGGCCCATTCCTTCGATTGGGAACTGGAAAATGGGCTGAACCCAGAAAAGCTGAATATGGATGAAGCGTATGGGCTAACTCTACAACGGGCTGTGCCTCTTTTGGTGCACCCCAGGCCCAGGCTCGCTCCACAGGCCTACTCGACGTCTTAG 1539 0.5205 MSPWVVALATMAAATIVYRLIKFITRPSLPLPPGPKPWPILGNFPHMGQVPHQSLATLARVHGPLMHLCLGFVDVIVVASSSVAEQFLKIHDSNFSNRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKITSVHLFSGRAMEEFRHLREEEVGRLTRNLASSDSKAVNLGQLLNVCTTNALGRVVIGRRVFDDGNGGCDHRADEFKAMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDAFLTSIVEEHKSSSSKSEKHKDLLSTLLSLRNVPDDDGNQLTDTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRILAQVQQEMDRVVGRERNVKEEDLAHLPYLQAVIKETFRLHPSTPLSLPRVASESCEIFGYHIPKGATVLVNVWAIARDPKEWADPLEFRPERFLPGGEKPDVDVRGNDFEVIPFGAGRRICAGLSLGLRMVQLLTATLAHSFDWELENGLNPEKLNMDEAYGLTLQRAVPLLVHPRPRLAPQAYSTS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00647 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Cca03g00647 512 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PANTHER FLAVONOID 3'-MONOOXYGENASE 5 501 - -
Cca03g00647 512 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 SUPERFAMILY Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 Gene3D Cytochrome P450 25 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g00647 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 501 - -
Cca03g00647 512 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00647 Cca-Chr3 11496689 11502891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00647 31 510 Cytochrome P450 AT5G07990 69.854 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00647 K05280 - gmx:547475 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00647 03 11496689 11502891 Cca03g00647 03 11496689 11502891 ECH