Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00638 ATGTATGAGGGATTAGAGCAGCAGATGCCTTCCTTCAATCTGCCTTCCAAAATATTGTGTAAAGTGGTCAATGTTCATCTTCGGGCTGAACTTGAAATAGATGAAGTATATGCACAGATAACTTTGCTTCCTGAAGCAGATCAAAGTGAGGTGACCAGCCCAGATGATCCTCTGCCTGAATCTCCGAGGGTCAAGGTCCATTCGTTTTGCAAGACACTTACTGCTTCAGGATATGTCTTTGCAGCCACCATGGCAAGAATTGGTTGCAACTGA 273 0.4432 MYEGLEQQMPSFNLPSKILCKVVNVHLRAELEIDEVYAQITLLPEADQSEVTSPDDPLPESPRVKVHSFCKTLTASGYVFAATMARIGCN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00638 90 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 76 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cca03g00638 90 PANTHER AUXIN RESPONSE FACTOR 1 7 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00638 Cca-Chr3 11226788 11227350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00638 1 76 B3 DNA Binding Superfamily AT1G59750 76.316 3.11e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00638 K14486 - gmx:100815450 150.214