Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00604 ATGGGAAAAGACTCGAAGGCAAAGGAGTCCGGGGGGAAGGGAAAGGGGAAACAGGCTGCAAGTGGAAGTGACGAGAATGCTTCTAAGGGCAAAGGAAAAGGTGGGAAAGGAGGAGATGCACTTGGTACTTGCACCTATGTCAAAGCGAGGCATGTCTTGTGTGAGAAACAAGGTAAGATCAATGAAGCCTACAAGAAACTGCAGGATGGTTGGCTTAGCGACGGAGATAAGGTCCCACCAGCTGAGTTTGCAAAGATAGCTCAAGAGTATTCAGAATGTCCTTCAGGGAAGAAGGGTGGAGACCTTGGATGGTTTCCCCGTGGAAAGATGGCTGGTCCTTTTCAGGATGTTGCCTTCAGCACACCTATTGGAGCTACTAGTGCTCCTTTCAAATCAACGCATGGCTACCATATTATCTTATGCGAAGGAAGAAAGAACTGA 441 0.4807 MGKDSKAKESGGKGKGKQAASGSDENASKGKGKGGKGGDALGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSDGDKVPPAEFAKIAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPIGATSAPFKSTHGYHIILCEGRKN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00604 146 MobiDBLite consensus disorder prediction 1 40 - -
Cca03g00604 146 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 146 - -
Cca03g00604 146 Pfam PPIC-type PPIASE domain 47 140 - -
Cca03g00604 146 PANTHER - 1 146 IPR043323 GO:0003677|GO:0003755|GO:0006364
Cca03g00604 146 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 44 143 IPR000297 GO:0003755
Cca03g00604 146 Gene3D - 45 144 IPR046357 GO:0003755
Cca03g00604 146 SUPERFAMILY FKBP-like 43 142 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00604 47 139 Sulfurtransferasese or Rhodanese AT5G19370 31.183 1.74e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00604 K09579 - gmx:100800792 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00604 03 10528422 10531163 Cca03g00604 03 10528422 10531163 ECH