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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g00590
ATGCAGGAAACTAAGGACCCCGCGATTAAGCTCTTCGGCCAGAAGATTCCCTTTCCCGGCGGCGCCGACGCTCCGCTCATTGCCGCTGCTGAATCTCCCTCGCCGCCGCTGATGGATGTCGACGGAGAAGATGACTTTGACTTTGCTGACTCCGAGGCTGAAGAAGACAAACATCAGGATCCTGGCGCTGAAACAATTAGTGAGAAAACAAAAGAAGTTGATCCTCCTCCAAATGGTGGTGAAGACTCTAACAAGAGCCCAGAGGGCATTCAGAAGCCAAACACACCTTCCATAGACGAAGAAAGTCAATCTGCAAAGTCAAAAAGCGAGAACAAGTCAGAGAACGACCCAaacaacaacaacaacaacaaaacaCTGAAAAAACCAGACAAGATCCTCCCGTGTCCACGGTGCAACAGCATGGACACCAAGTTCTGCTACTACAACAACTACAACGTGAACCAGCCACGCTACTTCTGCAAAGCGTGCCAAAGGTACTGGACCGCGGGTGGCACCATGAGAAACGTCCCAGTGGGTGCAGGGAGAAGAAAGAACAAGAACTCAGCCTCTCACTACCGCCACATCACCATCTCAGAGGCCCTTCAAGCTGCTAGAATCGAATCCCCAAATGTTCCAACTTTGAAAACTAATGGAAGAGTTCTCAGCTTCGGCTTGGACCCTCCCATTTGTGATTCCATGGCATCAGTGCTCAACCTCGCGGAGAACAACACAAGAAACGGCTTTCACAATCACGCCGTGGAGGATCAGAGAAACAAGGAAGATGATTGCTCAAGTGCTTCCTCCATCACGGTTTCTAATGAAGAGAGTGGGAAAAGCACGTCGCAGGAATCTATAATGGTGCAAAACATAAACAGCAACGGTTTCATTCCTCATGTTCCGTGTGTTTCAACTGTTCCTTGGCCTTACCCTTGGAACAATGGTGCACCTGCTTTGTGCCCTCCAGGGTTTCCCATGTCATTCTACCCTGCTGCGGCATTTTGGAACATTCCATGGTTTCCCTCACATTCTCCAACGCTTGGGAAGCACTCGAGGGAGGATGACGTGGCCAAAGAGGACCCTTTGAGGCAGAGAAACGGGTCTTCTGTTTTGGTGCCAAAAACATTGAGGATTGATGACCCCAGTGAGGCTGCAAAGAGTTCTATATGGGCAACGTTGGGGATCAAGAACGAGTGTGTGAGTGGGGGAGGCATGTTCAAAGGATTCCAATCCAAGAAGGACGAGAAAAACCACGTTGTTGAAACCTCTCCTGTCTTGAGGGCCAACCCTGCAGCCTTGTCTAGATCCCTAAATTTTCACGAAAACTCTTGA
1329
0.4898
MQETKDPAIKLFGQKIPFPGGADAPLIAAAESPSPPLMDVDGEDDFDFADSEAEEDKHQDPGAETISEKTKEVDPPPNGGEDSNKSPEGIQKPNTPSIDEESQSAKSKSENKSENDPNNNNNNKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIESPNVPTLKTNGRVLSFGLDPPICDSMASVLNLAENNTRNGFHNHAVEDQRNKEDDCSSASSITVSNEESGKSTSQESIMVQNINSNGFIPHVPCVSTVPWPYPWNNGAPALCPPGFPMSFYPAAAFWNIPWFPSHSPTLGKHSREDDVAKEDPLRQRNGSSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVSGGGMFKGFQSKKDEKNHVVETSPVLRANPAALSRSLNFHENS
442
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g00590
442
PANTHER
CYCLIC DOF FACTOR 2
1
441
IPR045174
GO:0003700|GO:0006355
Cca03g00590
442
ProSitePatterns
Zinc finger Dof-type signature.
135
171
IPR003851
GO:0003677|GO:0006355
Cca03g00590
442
PANTHER
CYCLIC DOF FACTOR 1
1
441
-
-
Cca03g00590
442
MobiDBLite
consensus disorder prediction
251
282
-
-
Cca03g00590
442
MobiDBLite
consensus disorder prediction
52
78
-
-
Cca03g00590
442
Pfam
Dof domain, zinc finger
130
187
IPR003851
GO:0003677|GO:0006355
Cca03g00590
442
MobiDBLite
consensus disorder prediction
1
133
-
-
Cca03g00590
442
MobiDBLite
consensus disorder prediction
84
102
-
-
Cca03g00590
442
ProSiteProfiles
Zinc finger Dof-type profile.
133
187
IPR003851
GO:0003677|GO:0006355
Cca03g00590
442
MobiDBLite
consensus disorder prediction
346
367
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g00590
Cca-Chr3
10242919
10246292
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g00590
1
440
C2C2-Dof Transcription Factor Family
AT3G47500
48.247
5.38e-122
360
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-Dof
Cca03g00590
zf-Dof
1.9e-32
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g00590
-
-
gsj:114409713
644.039
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g00590
03
10242919
10246292
Cca11g01967
11
45063844
45066553
ECH
Cca07g02169
07
49860971
49864544
Cca03g00590
03
10242919
10246292
ECH
Cca06g00639
06
18072197
18076158
Cca03g00590
03
10242919
10246292
ECH
Cca03g00590
03
10242919
10246292
Cca03g00590
03
10242919
10246292
ECH
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