Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00576 ATGGCAGAGCAAAGCAAGGTGATCCTGCATGGAATGTGGCATAGCCCTTTTGCCAAGAGGGTTGAATTGGCCCTTAAACACAAGGGCATACCCTACGAGTATGTGGAAGAAGACTTGAGAAATAAGAGTGATTTACTTCTGAAGTACAACCCTGTTCACAAGAAGGTTCCTGTGCTTGTTCATAATGGAAAGGCCATAGCTGAATCCATGGTGATCCTTGAGTACATTGATGAAACATGGAAAGATGGTCCTAAACTGCTTCCCAGTGATTCCTACAAAAGAGCACAAGCTCGCTTCTGGTCTAACTTCATCCAGGATCAGTTAATGGAGAACAGTTTTCTAGTAGTGAAAACTGATGGAGAAGCGCAACAAAAGGCTATTAACCAAATATATGAGAAACTGAGTCTGCTTGAAGATGGGATGAAAAGCTATCAGGCAGAAGGCAATGTTGGTGTTGAAAACAAGTTTGGAATCTTGGAAATTGTGTTTTGTGTGCTATTTGGTCCTTACAAGGCTCAGGAAGAAGTTCTTGGCATGAAGTTCATCGTGCCAGAAAAGTTTCCAGTGTTGTTTTCTTGGTTGATGGCAATTGTTGAGGTAGAAGCAGTGAAAAAAGCAGCTCTTCCACATGAAAAAACAGTGGCGATTCTTCAGCATTATAGGCAATCTGCACTGAAGTCTTCTGCCACACCTTGA 696 0.4224 MAEQSKVILHGMWHSPFAKRVELALKHKGIPYEYVEEDLRNKSDLLLKYNPVHKKVPVLVHNGKAIAESMVILEYIDETWKDGPKLLPSDSYKRAQARFWSNFIQDQLMENSFLVVKTDGEAQQKAINQIYEKLSLLEDGMKSYQAEGNVGVENKFGILEIVFCVLFGPYKAQEEVLGMKFIVPEKFPVLFSWLMAIVEVEAVKKAALPHEKTVAILQHYRQSALKSSATP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00576 231 Gene3D - 87 228 - -
Cca03g00576 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Cca03g00576 231 SUPERFAMILY GST C-terminal domain-like 78 222 IPR036282 -
Cca03g00576 231 CDD GST_C_Tau 92 220 IPR045074 GO:0004364|GO:0006749
Cca03g00576 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 227 IPR045073 -
Cca03g00576 231 PANTHER GLUTATHIONE S-TRANSFERASE U9-LIKE 1 227 - -
Cca03g00576 231 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Cca03g00576 231 CDD GST_N_Tau 7 80 - -
Cca03g00576 231 SFLD Glutathione Transferase (cytosolic) 4 228 IPR040079 -
Cca03g00576 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Cca03g00576 231 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Cca03g00576 231 SFLD Main.3: Omega- and Tau-like 4 228 IPR045073 -
Cca03g00576 231 Gene3D Glutaredoxin 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00576 Cca-Chr3 9857235 9859011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00576 4 230 Glutathione S-transferase Gene Family AT1G74590 45.374 7.26e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00576 K00799 - gmx:547581 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00576 03 9857235 9859011 Cca03g00576 03 9857235 9859011 ECH