Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00568 ATGCAGATCCCTTTTGAAGACAATTCAGGAGACACGCCAACTTTAACCCAATCATTTGGCCTACAATTTGGATCTGATTATGGCACCGGTTTACTAGGGAACTATACTCGTAATGCAAGTTCTGAAATTGCTCCAGTCCTGTATAATTTTCATGGTGAATCAAAAGAGCAGACTATGCAGCAAAACTATCCAGAAGAGCATGCAGATGAACAATCTCAATATGCAGTAAAATCCAATTCTGCAAATAAAATTCCTGATGAAGAAACCATCAATTATGGCTTAAATGTGAAGTACGCATTATTAGACAGAGACGAGAGCCTGAAGAAGGTTGATAGCTTCTCTCGATGGGTTACTAAAGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTACAGATGAATGCCAGCATGTGATAGATGATACCTCATTGAGTCCATCTCTCTCTCAGGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTCAGAAATTGAGATTAACCTTGATGAGATGGATGTTTTCTATTCTGCGCAGGTCGCAGCTTCTCAAGTCTTGACTGTTGATTTTGTTAGTGAGATCTAG 621 0.3961 MQIPFEDNSGDTPTLTQSFGLQFGSDYGTGLLGNYTRNASSEIAPVLYNFHGESKEQTMQQNYPEEHADEQSQYAVKSNSANKIPDEETINYGLNVKYALLDRDESLKKVDSFSRWVTKELGEVADLNMQSSPGISWSTDECQHVIDDTSLSPSLSQDQLFSINDFSPKWAYAESEIEINLDEMDVFYSAQVAASQVLTVDFVSEI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00568 206 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 181 - -
Cca03g00568 206 MobiDBLite consensus disorder prediction 57 80 - -
Cca03g00568 206 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00568 Cca-Chr3 9709396 9715609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00568 87 179 CAMTA Transcription Factor Family AT5G64220 55.319 1.04e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00568 K21596 - gmx:100818124 317.005