Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00561 ATGGATTCCGTTAAGATCTTCAAAGGCTACGACAAACTACAACACCATCCAAACCCAAAACCCAAACCCTTCACCGCCACACTTTCCATCCTCGCAATCCTCTTCCtcaccttcaccttcgccttcgccctcgcctccatcctccaccaccaccaccaccaccaccaccaccaccgcaccgccaccGAGTCACCCCAACACCAACAACTTCTCAACTCGGCCGAGTCCATCCGAGTCGTCTGCAACGTCACGCGCTTCCCAGGCGCCTGCCTCGCCGCCATCCCGCCCTCCCCCAACGCCACAAGCCCCCAGTCCATCCTCGCCCTCTCGCTCCGCGCGTCCGTCCACGCGCTCCGCAGCGTCGCCTCCACGCTCGCCGCCGCCCAGGGACACGCGCTCGCCGACTGCAGGGACCAGCTCGACGACGCGCTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGCCGTGGCCGACGTCCAGACGTGGGTGAGCGCGGCGGTGACCGACCAGCAGACGTGCCTCGACGGTCTGGAGGAGGTGGGTGA 669 0.432 MDSVKIFKGYDKLQHHPNPKPKPFTATLSILAILFLTFTFAFALASILHHHHHHHHHHRTATESPQHQQLLNSAESIRVVCNVTRFPGACLAAIPPSPNATSPQSILALSLRASVHALRSVASTLAAAQGHALADCRDQLDDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRGRRPDVGERGGDRPADVPRRSGGGG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00561 222 Coils Coil 133 144 - -
Cca03g00561 222 PANTHER PECTINESTERASE 1-LIKE 4 151 - -
Cca03g00561 222 MobiDBLite consensus disorder prediction 198 213 - -
Cca03g00561 222 Pfam Plant invertase/pectin methylesterase inhibitor 76 145 IPR006501 GO:0004857
Cca03g00561 222 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 150 IPR035513 -
Cca03g00561 222 MobiDBLite consensus disorder prediction 187 222 - -
Cca03g00561 222 PANTHER PECTINESTERASE 4 151 - -
Cca03g00561 222 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 144 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00561 1 144 Carbohydrate Esterase AT1G53840 29.221 5.54e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00561 - - ccaj:109814536 234.187