Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00534 ATGGAGTTTGCGAAGTCCAAGTGGGTATCGACGGTGGCGAGCATATGGATTCAGTGCACCAGCGGATCACTCTACACTTTCTCCATCTACTCCCAAACCCTCAAGTCAACGCAGCACTACGATCAGTCAACGCTCGACATCGTCTCCGTCTCAAAGGACATCGGAGCCAACGTGGGCGTCGTCTCTGGGCTGCTCTACGATTTCCTTGCGCGCCGCACAACCGCCACTGGGCCCTGGCTCGTCCACTTCTTGGGCTCGGCCCAATGCTTCCTCGGCTACTTCCTCATGTGGGCCGCCGTCTCCGCCCTCCTTCCGCCGCTGCCCGTGCCTTTCATGTGCCTCTTCATGTTTCTGGCGGCCCATGCTCAGAGCTACTTCAACACTTCCAACGTTGTCACTGGCGTCCACAATTTCCCTAACTATAGCGGAACCATCGTCGGCATTATGAAGGGATTTCTTGGTCTCAGTGGAGCAATATTAATTCAAGTGTACCAAACAATATTCAACAACAAGCCTAAGTCATATCTTCTGATGCTAGCACTCTTACCACCTATCAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAACACTCATGAGAGGGAGGAAAGGAAGTATCTGAACATATTTTCTTTGATGGCTCTGGTTGTTGCTGCATACCTTATGGTTGTTATAATCCTAGAAAACATCCTTAGTCTGCAATCATTGGTGCACATCTTTATATTTGTTGTGCTTATGATGTTACTAGCCTCACTTTCTTGCATTGCATTTGTAGCACATGAAAAGAGCTCTTCTAGAAATTCAGAAAGTTTTATGGATGAGGGGTCACGACTAATTGTGGAGCCAAGCCCCCTGCATACCACTGAAAAGGTGGATGCAAGGCAAGATTCTTTGAACAACCAAAGGAATAATTTGCAACTAGGAGAAAACCTGAATCTTTTACAAGCAATGCAAACTGTGAACTTTTGGATCATGTTTATTTCTACTGCATGTGGTATGGGATCAGGACTTGCAACTGTTAACAACTTGGGTCAAATAGGGGAATCCCTTGGTTATACCAGCCATGAGACAGGTTCCTTGGTTTCTTTATGGAGCATTTGGAATTTTCTGGGCCGCTTTGGAGCTGGTTATGTGTCGGATTATTATTTGCACACAAGAAGATGGGCAAGACCTTTATTTATGGTCATCACTTTAATGATCATGAGCATTGGCCATGTGGTGATTGCTTCTGGACTACCTGGTGCCCTATATGCAGGTTCCATATTGAACCTTGGTGCCATGAGTTGCAACGGTCTTCACATTCTCTTCCTTTGTGTCATATTATCACGTCTTTTGAAGTTCTCTTCATCTTTTGTTGTTTGCACCAACTCAAGTGGGAGTGGCTTCCCTGAGGCTCCTCTGAAAATCTGTTCTTGCGATGGAAAGACAGAGGCATGTTGTAACGCTGGTGAAGCAAGGTTTCAGAAACAATTGCACGAGTTAAACGTCACTAACCCAAATTGTGCTTCATCTCTCCTCAAGTCCATTTTATACGCGATAAGTGATGGTCAGTTTTCTGAAAAATCGTTCCAAACTGCCTCAGGCATTAAAACTGTTCCCCTTTTGTGCAACACCACATTACCAGTTAAGTCACAACAATCCAGTGGTGATTGTTCTTTTGATTTCTGCACAAAGATTTGGGAAACATGTGAAAATGTTTCTATAATTAATTCCCCATTTGAATCTTTCTTACAAGACAAAACTGGCAAGGACCTTGGCTTCTTAACTTCAACAGTGAGAGATATTTGGAAGTCTAGGAGAAGCTTTTGTGAGACATTTTGTGGATCTTCAGAAGATGAAAAAGCATGCTTCAACGGTGAACCAATTTCATTGAACAATGAACAAACCCCCTTTTTTCCTAAGGGTCTATGCTTGGAGAAAATTGGAGAAGGGTCATACCTTAATATGGCTCCACATCCTGATGGTTCTAACCGTGCCTTCTTTGCCAATATGCAAGGAAAGATATGGTTGGCAAAGATTCCTGTTGAGGGGTCCAATGAGATTTTGGAAATTGATGAATCCAAAACCTTTTTAGACATCAGTGATGATATTATATTTGATACTGGGCATGGTTTATTGGGAATGACATTTCATCCAAATTTTTCACAAAATGGCCGCTTCTTTCTCTCTTATAATTGTGATCAGATGAAAAATCCTAGATGTTCTGGAAGGTGTGCGTGTAACTCGGATGTGAATTGTGATCCTTCAAAACTTGGTGCTAGAGGTATCTTCCCATGCCAGTATCACAATGTCGTAGCAGAATTTACAGTCAATGGCTCTTCATCAAAGCCTTCCTTGGCTGAAAGTGCCAATCCATCAGAAGTGAGAAGAATATTCACAATTGGTGTTCCTCAAAGTGGAGGTCATGCTGGTCAGATTTTGTTTGGACCTGGTGATGGATATTTGTACCTCATGTTGTCTGATGGCTATAATCGTGATGATCCTTACAACTTTGCCCAAAACAAGAAATCCTTATTGGGAAAGATTTTGAGAATTGATGTTGATAATATACCCAGTCCCAGAGAAATAAATGAGATGGGCTTGTGGGGAAATTATTCTATACCTAGAGATAATCCATATGTCAGTGACAATGAACTTGAGAGAGAGATATGGGCCATTGGTTTCAAGAATACTTGGCGCTGTAGTTTTGACTTTGAGAGACCATCCTATTTTCTATGTGGAGATGCTGGCCAGGTTTAG 2742 0.4278 MEFAKSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVSKDIGANVGVVSGLLYDFLARRTTATGPWLVHFLGSAQCFLGYFLMWAAVSALLPPLPVPFMCLFMFLAAHAQSYFNTSNVVTGVHNFPNYSGTIVGIMKGFLGLSGAILIQVYQTIFNNKPKSYLLMLALLPPINTLLLMWFVRIHNTHEREERKYLNIFSLMALVVAAYLMVVIILENILSLQSLVHIFIFVVLMMLLASLSCIAFVAHEKSSSRNSESFMDEGSRLIVEPSPLHTTEKVDARQDSLNNQRNNLQLGENLNLLQAMQTVNFWIMFISTACGMGSGLATVNNLGQIGESLGYTSHETGSLVSLWSIWNFLGRFGAGYVSDYYLHTRRWARPLFMVITLMIMSIGHVVIASGLPGALYAGSILNLGAMSCNGLHILFLCVILSRLLKFSSSFVVCTNSSGSGFPEAPLKICSCDGKTEACCNAGEARFQKQLHELNVTNPNCASSLLKSILYAISDGQFSEKSFQTASGIKTVPLLCNTTLPVKSQQSSGDCSFDFCTKIWETCENVSIINSPFESFLQDKTGKDLGFLTSTVRDIWKSRRSFCETFCGSSEDEKACFNGEPISLNNEQTPFFPKGLCLEKIGEGSYLNMAPHPDGSNRAFFANMQGKIWLAKIPVEGSNEILEIDESKTFLDISDDIIFDTGHGLLGMTFHPNFSQNGRFFLSYNCDQMKNPRCSGRCACNSDVNCDPSKLGARGIFPCQYHNVVAEFTVNGSSSKPSLAESANPSEVRRIFTIGVPQSGGHAGQILFGPGDGYLYLMLSDGYNRDDPYNFAQNKKSLLGKILRIDVDNIPSPREINEMGLWGNYSIPRDNPYVSDNELEREIWAIGFKNTWRCSFDFERPSYFLCGDAGQV 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00534 913 Gene3D - 643 913 IPR011042 -
Cca03g00534 913 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 423 - -
Cca03g00534 913 CDD MFS_Mch1p_like 6 424 - -
Cca03g00534 913 Pfam Nodulin-like 7 253 IPR010658 -
Cca03g00534 913 SUPERFAMILY MFS general substrate transporter 7 200 IPR036259 -
Cca03g00534 913 SUPERFAMILY MFS general substrate transporter 209 462 IPR036259 -
Cca03g00534 913 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 423 - -
Cca03g00534 913 Pfam Glucose / Sorbosone dehydrogenase 650 893 IPR012938 -
Cca03g00534 913 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 645 912 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00534 Cca-Chr3 8980169 8990443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00534 1 423 Nodulin-like Gene Family AT1G74780 52.074 4.60e-141 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00534 - - gmx:100814668 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00534 03 8980169 8990443 Cca03g00534 03 8980169 8990443 ECH