Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00489 ATGAGTGGCATTGGCAGGGAGAAGGGAATTTACAGTCTCAACAATTACCTGCAAGTTAAAGCTGTGGTTTCACCATTGAAGAATCCTGCATGGCTCTTAAGCACCGTTGCAGAAATTGATGATCTAGTCACACCACCTGTGGAAATAAGATACACTAAAAATCTAATAAATGGGGAGTTTGTGGATGCTGTGTCAGGAAAAACATTTCCTACATATGACCCGCGAACTGGGGAAGTGATTGCTAACGTTGCTGAAGGTGACCAAGAAGATATCAATCGTGCAGTGTCTGCAGCTCGAAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACCCCTTATGTATGA 345 0.4377 MSGIGREKGIYSLNNYLQVKAVVSPLKNPAWLLSTVAEIDDLVTPPVEIRYTKNLINGEFVDAVSGKTFPTYDPRTGEVIANVAEGDQEDINRAVSAARKAFDEGPWPKMTPYV 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00489 114 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 32 - -
Cca03g00489 114 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 1 32 - -
Cca03g00489 114 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 34 113 - -
Cca03g00489 114 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 45 114 IPR016162 GO:0016491
Cca03g00489 114 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 34 113 - -
Cca03g00489 114 SUPERFAMILY ALDH-like 47 112 IPR016161 GO:0016491
Cca03g00489 114 Pfam Aldehyde dehydrogenase family 61 112 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00489 Cca-Chr3 7982058 7982921 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00489 37 113 Aldehyde Dehydrogenase Gene Family AT1G23800 71.429 1.12e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00489 K00128 - pvy:116135665 140.969