Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00482 ATGGCATTTGAAGTAAGAGATGGTGTTGGTGATTGGCCTTTAGAGATTTTTAAAGACTGTGCTTCTACAAGTGAAATTGATGGAAATACAGTTTCTTTTACATTTCAAGAGTCTCAAGAAGAACCACTGCTTGAAGCCAATAATATTTATGATGAAGTTCCTTATGAAGGGAAAATGTTTAATAGCTATGATGAAGCTTATGAATTTTCTTATGCATTTGCACGAAAAAATGGCTTTTCGATTAGACGTGAACATACTTACAAATCTAGTAAGAATCAAACTGAGGAGAATCCATTGGGTATTTATAAAAGGGAATTTGTTTGTCATCGTGCTGGTTCTGTTAAACAGCGCAAATTTATTGAAGAGGAAAGTCAAAGAAAACGGAAAAGTTCAAGATTCCGATGTTTGGAAGTTGAATCTCTGAAGACAAAAGATCGAGTTAAAGTTGCTACTAAAGAGTTAGGGAAAGTCATTCAAATCATAAAAGTCATGCCTGAGATTCAAGAGAAATCAATTGAGTTGGAACATGATGTACCAAATAACAGTGGCTGTGAGCTTGAAGTTGAAAATCCCATCATTTCTAAGACAAAAGGTAGACCAAAAGGATCAAGGCCAAAAGGAGGAGTTGAAGCTGCAAAAAAGTCTCGTCGTTGTCATTTTCCTAATTGTGGTGGAACCAATCATGACTCGCGAAATTGTCCAAACAAAAAGAATAGCATTGATATATTGCCTTCTCAATCTCCTAATAAGATAACAAAGGGTTGGAGAAAGTAA 774 0.3527 MAFEVRDGVGDWPLEIFKDCASTSEIDGNTVSFTFQESQEEPLLEANNIYDEVPYEGKMFNSYDEAYEFSYAFARKNGFSIRREHTYKSSKNQTEENPLGIYKREFVCHRAGSVKQRKFIEEESQRKRKSSRFRCLEVESLKTKDRVKVATKELGKVIQIIKVMPEIQEKSIELEHDVPNNSGCELEVENPIISKTKGRPKGSRPKGGVEAAKKSRRCHFPNCGGTNHDSRNCPNKKNSIDILPSQSPNKITKGWRK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00482 257 Pfam FAR1 DNA-binding domain 69 145 IPR004330 -
Cca03g00482 257 MobiDBLite consensus disorder prediction 225 257 - -
Cca03g00482 257 MobiDBLite consensus disorder prediction 195 257 - -
Cca03g00482 257 MobiDBLite consensus disorder prediction 203 217 - -
Cca03g00482 257 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 35 136 - -
Cca03g00482 257 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 136 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00482 Cca-Chr3 7786881 7790413 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Cca03g00482 FAR1 1.2e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00482 - - ccaj:109802755 265.774