Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00468 ATGGAGAGCAAGTTGGAGGGCATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGACATAGTGATATGAGTATGGGTGTTGGGCTAGGAGATATGAACAATACTCAAAATGGGTTGCCACCAAATTTTCATGGTCTTTGCACCCCAGCATTTGGTAGCATGTCCCTTGATGGCAACAACAGTGGTAACGGGGCAAACTACTTAATGGACTCTTGCCAACGTTTGATGCTGCCATATGATGCCAATGAGGACCATAATGCCTCAATTGATGTGAAGCCAAACCCTAAACAACTATTGTCCCTTGAATGGCAAGACCAGGGTTGCTCTGATGCAGGAAAAGACTCATTTGGGTATCTCAACGGTCCAGGATCATGGACTGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA 432 0.4444 MESKLEGIIGSSSSRNFDFFGHSDMSMGVGLGDMNNTQNGLPPNFHGLCTPAFGSMSLDGNNSGNGANYLMDSCQRLMLPYDANEDHNASIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMNGYGSSTTNPLV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00468 143 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 137 IPR045174 GO:0003700|GO:0006355
Cca03g00468 143 PANTHER - 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00468 Cca-Chr3 7393311 7393742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00468 70 143 C2C2-Dof Transcription Factor Family AT5G62940 46.000 4.85e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00468 - - gmx:100806697 237.654