Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00463 ATGGAGGGTGTGAAATTTACCCCTGCTTATTTGCAATCTGCTGGGTTAAATGTTAGACAAGTTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATATTGCAAAGGGTATCACCAGTTACCCACTCTGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAGACACCTGTCTCACCTGTGAATGCTTTTGGGACTGCTATAGCTCTTGCCGGCGTTTTCCTCTATTCAAGGGTGAAGCGAATCAAGTCAAAGCCAAAAACAGCTTAA 318 0.434 MEGVKFTPAYLQSAGLNVRQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKSKPKTA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00463 105 SUPERFAMILY Multidrug resistance efflux transporter EmrE 17 96 - -
Cca03g00463 105 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 1 99 - -
Cca03g00463 105 PANTHER SOLUTE CARRIER FAMILY 35 1 99 - -
Cca03g00463 105 Pfam Triose-phosphate Transporter family 1 93 IPR004853 -
Cca03g00463 105 Gene3D - 5 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00463 Cca-Chr3 7277147 7278542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00463 2 105 Antiporters AT5G33320 86.538 2.73e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00463 K15283 - gmx:100804563 191.815