Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00462 ATGCAGAGCGCGGctttcactctctctccctcgctccctctcccaaacccttctccAAACGCCTTCAGAGTAAGACCCTCGCTCTCTCTTCGCGTCTCTGCCAAACATGGCAACGCCGACGGCGTCTCTTCCTCTTCCTTCGTTCGCCGATCTTGGACTCTCTCTCCCTCCTCTTCCTTCAAGTTCCGCCCTCTCTCTTCCCCTTCGCCTCCACGCGCCGCCGAAAACGCCGTTCCCGATAGTGTCCCCGCCGAGAACACGCTCTTCAAGACTCTCGAACTCGGCGCCTTGTTCGGCCTCTGGTACCTCTTCAACATCTACTTCAATATCTACAACAAGCAGGTGTTGAAGGCGTATCATTTTCCGGTGACTGTGACTCTCACGCAGTTTGCCGTTGGGACTGTTATTGTGGCGTTAATGTGGGGTTTGAATCTGTACAAGAGGCCGAAACTCAGTGGTGCTATGCTTGGAGCGATTTTGCCGTTGGCTGCGGTGCATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGGAAGGTGGCTGTGTCTTTCACTCACACGATCAAGGCCATGGAGCCTTTCTTTTCGGTCGTCCTATCTGCCATGTTCCTTGGAGAGTTCCTTACACCTTGGGTGAGGCCTCTTTCAATTAGGCTGGATTTTGGAGTGCAATGGCATCCAATGTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGGCCATGGTTAATAAAGAGGAATCCTTGGACAACATTACTCTCTTCTCTATAA 771 0.4773 MQSAAFTLSPSLPLPNPSPNAFRVRPSLSLRVSAKHGNADGVSSSSFVRRSWTLSPSSSFKFRPLSSPSPPRAAENAVPDSVPAENTLFKTLELGALFGLWYLFNIYFNIYNKQVLKAYHFPVTVTLTQFAVGTVIVALMWGLNLYKRPKLSGAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEFLTPWVRPLSIRLDFGVQWHPMCQINLVMFLAKRPWLIKRNPWTTLLSSL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00462 256 MobiDBLite consensus disorder prediction 57 78 - -
Cca03g00462 256 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 40 213 - -
Cca03g00462 256 PANTHER SOLUTE CARRIER FAMILY 35 40 213 - -
Cca03g00462 256 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 211 - -
Cca03g00462 256 Pfam Triose-phosphate Transporter family 93 212 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00462 Cca-Chr3 7275475 7277102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00462 1 232 Antiporters AT5G33320 56.574 2.05e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00462 K15283 - gmx:732612 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00462 03 7275475 7277102 Cca11g01831 11 43329067 43333269 ECH
Cca03g00462 03 7275475 7277102 Cca03g00462 03 7275475 7277102 ECH
Cca11g01831 11 43329067 43333269 Cca03g00462 03 7275475 7277102 PCT